RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MASP1P48740 699 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 SOX10P56693 466 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 FPGSQ05932 587 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 DYRK1AQ13627 763 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 TMPRSS9Q7Z410 1059 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 NPM2Q86SE8 214 aaKnown RBP5.35□□□□□ -1.55
SMC4-227ENST00000497984 NOP9Q86U38 636 aaKnown RBP5.35□□□□□ -1.55
SMC4-227ENST00000497984 RHOT1Q8IXI2 618 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 Q8N9P0 234 aaPredicted RBP5.35□□□□□ -1.55
SMC4-227ENST00000497984 C9orf106Q8NAJ2 232 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 MYCBPAPQ8TBZ2 947 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 RAB24Q969Q5 203 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 LRIG1Q96JA1 1093 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 WDR91A4D1P6 747 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 LINC00473A8K010 186 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 K7ESF4 209 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 ATP2B3Q16720 1220 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 FLYWCH1Q4VC44 716 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 PABPC1LQ4VXU2 614 aaKnown RBP5.34□□□□□ -1.55
SMC4-227ENST00000497984 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.55
SMC4-227ENST00000497984 ZNF425Q6IV72 752 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 AMIGO2Q86SJ2 522 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 ADGRG5Q8IZF4 528 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 IFI44Q8TCB0 444 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 COG1Q8WTW3 980 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 PGBD1Q96JS3 809 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 KLHL32Q96NJ5 620 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 INTUQ9ULD6 942 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 NEU2Q9Y3R4 380 aa5.34□□□□□ -1.55
SMC4-227ENST00000497984 VWC2LB2RUY7 222 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 PROB1E7EW31 1015 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 PRKCGP05129 697 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 CHRM2P08172 466 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 MTHFD1P11586 935 aaKnown RBP5.33□□□□□ -1.56
SMC4-227ENST00000497984 PPP3CBP16298 524 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 ANXA11P50995 505 aaKnown RBP5.33□□□□□ -1.56
SMC4-227ENST00000497984 HNRNPMP52272 730 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMC4-227ENST00000497984 MC2RQ01718 297 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 FCRLBQ6BAA4 426 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 SPATS2Q86XZ4 545 aaKnown RBP5.33□□□□□ -1.56
SMC4-227ENST00000497984 IL17RDQ8NFM7 739 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 WNT6Q9Y6F9 365 aa5.33□□□□□ -1.56
SMC4-227ENST00000497984 CDC42EP1Q00587 391 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 CT47A1Q5JQC4 288 aaPredicted RBP5.32□□□□□ -1.56
SMC4-227ENST00000497984 KIAA1614Q5VZ46 1190 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 PPM1NQ8N819 430 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 NSUN7Q8NE18 718 aaKnown RBP5.32□□□□□ -1.56
SMC4-227ENST00000497984 TMX3Q96JJ7 454 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 JKAMPQ9P055 326 aa5.32□□□□□ -1.56
SMC4-227ENST00000497984 CCDC195A0A1B0GUA6 201 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 SLC43A1O75387 559 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 SSBP2P81877 361 aaPredicted RBP5.31□□□□□ -1.56
SMC4-227ENST00000497984 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SMC4-227ENST00000497984 TFF2Q03403 129 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 ZNF365Q70YC5 407 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 CFAP52Q8N1V2 620 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 TMIEQ8NEW7 156 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 WDR66Q8TBY9 1149 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 SNX19Q92543 992 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 TDP1Q9NUW8 608 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 FLRT1Q9NZU1 646 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 SLC45A2Q9UMX9 530 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 ST3GAL5Q9UNP4 418 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 PCDHA13Q9Y5I0 950 aa5.31□□□□□ -1.56
SMC4-227ENST00000497984 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 ADGRA2Q96PE1 1338 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 E7ENX8 843 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 CPEP16870 476 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 HSD3B2P26439 372 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 ZNF280AP59817 542 aaPredicted RBP5.3□□□□□ -1.56
SMC4-227ENST00000497984 TAP2Q03519 686 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
SMC4-227ENST00000497984 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 PDPRQ8NCN5 879 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMC4-227ENST00000497984 SSH1Q8WYL5 1049 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 MRGPRX4Q96LA9 322 aa5.3□□□□□ -1.56
SMC4-227ENST00000497984 SLKQ9H2G2 1235 aaPredicted RBP5.3□□□□□ -1.56
SMC4-227ENST00000497984 GCOM1H8Y6P7 765 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 TOR1BO14657 336 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 SGTAO43765 313 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 CD1AP06126 327 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 POU3F3P20264 500 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 NXPH1P58417 271 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 POU6F2P78424 691 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 ITIH3Q06033 890 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 KLF1Q13351 362 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 EZH2Q15910 746 aaKnown RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 SRSF7Q16629 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMC4-227ENST00000497984 PREPLQ4J6C6 727 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 RASAL3Q86YV0 1011 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 HAPLN3Q96S86 360 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms