RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 DNAJB4Q9UDY4 337 aa17.14■□□□□ 0.33
PTK7-220ENST00000497957 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
PTK7-220ENST00000497957 NME7Q9Y5B8 376 aa17.14■□□□□ 0.33
PTK7-220ENST00000497957 TTC3P53804 2025 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 I3L4J1 428 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 PODXLO00592 558 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 CYP26A1O43174 497 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 ITGB1P05556 798 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 CYP3A5P20815 502 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 HNRNPH3P31942 346 aaKnown RBP17.13■□□□□ 0.33
PTK7-220ENST00000497957 CLCN1P35523 988 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 STAT1P42224 750 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 MFAP3P55082 362 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 WDR5P61964 334 aaKnown RBP17.13■□□□□ 0.33
PTK7-220ENST00000497957 GRIK3Q13003 919 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 ZNF667Q5HYK9 610 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 OTOP2Q7RTS6 562 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 SLC20A1Q8WUM9 679 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
PTK7-220ENST00000497957 A0A0U1RQJ8 604 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 EVI5O60447 810 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 KRT5P13647 590 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
PTK7-220ENST00000497957 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
PTK7-220ENST00000497957 GCNT1Q02742 428 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 TOGARAM2Q6ZUX3 1019 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 DNAAF5Q86Y56 855 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 ZNF397Q8NF99 534 aaPredicted RBP17.12■□□□□ 0.33
PTK7-220ENST00000497957 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 IQCDQ96DY2 449 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 LPIN3Q9BQK8 851 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
PTK7-220ENST00000497957 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
PTK7-220ENST00000497957 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
PTK7-220ENST00000497957 ATICP31939 592 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 PBX3P40426 434 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 BRCC3P46736 316 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 FPGSQ05932 587 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 DSC1Q08554 894 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 TUSC3Q13454 348 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 ZNF571Q7Z3V5 609 aaPredicted RBP17.11■□□□□ 0.33
PTK7-220ENST00000497957 OSTM1Q86WC4 334 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 FAM71AQ8IYT1 594 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 LRRC52Q8N7C0 313 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 TAF4BQ92750 862 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 TSPAN18Q96SJ8 248 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.336e-9■□□□□ 10
PTK7-220ENST00000497957 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 NRDE2Q9H7Z3 1164 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
PTK7-220ENST00000497957 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
PTK7-220ENST00000497957 ABHD14A-ACY1A0A1B0GW23 586 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 XPOTO43592 962 aaKnown RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 KIF4AO95239 1232 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 STAU1O95793 577 aaKnown RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 CFHP08603 1231 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 CHRNB2P17787 502 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 RFX1P22670 979 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 LILRA4P59901 499 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 UPP1Q16831 310 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 TMEM240Q5SV17 173 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 TAF3Q5VWG9 929 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 SLC47A2Q86VL8 602 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 COLGALT2Q8IYK4 626 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 RBBP8NLQ8NC74 664 aaPredicted RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 DPF3Q92784 378 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 MMS19Q96T76 1030 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 ZSWIM1Q9BR11 485 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 SYT11Q9BT88 431 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
PTK7-220ENST00000497957 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 L1RE1Q9UN81 338 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
PTK7-220ENST00000497957 REXO2Q9Y3B8 237 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms