RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
VPS45-210ENST00000497638 SDHBP21912 280 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 PPM1AP35813 382 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 HAND2P61296 217 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 TNK2Q07912 1038 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 KIAA1841Q6NSI8 718 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 SPOCD1Q6ZMY3 1216 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 DPH2Q9BQC3 489 aaPredicted RBP8.69□□□□□ -1.02
VPS45-210ENST00000497638 DCTPP1Q9H773 170 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 VAT1LQ9HCJ6 419 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 CYP26B1Q9NR63 512 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 C1orf112Q9NSG2 853 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 ERAP1Q9NZ08 941 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 CDH22Q9UJ99 828 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 HCFC2Q9Y5Z7 792 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 AK5Q9Y6K8 562 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 LOXHD1Q8IVV2 1947 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 KDM3AQ9Y4C1 1321 aa8.69□□□□□ -1.02
VPS45-210ENST00000497638 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 HIDE1A8MVS5 230 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 PI15O43692 258 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 TCF7P36402 384 aaPredicted RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 MRPS9P82933 396 aaKnown RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 SP4Q02446 784 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 TDGQ13569 410 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 SMC1AQ14683 1233 aaKnown RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 ST3GAL2Q16842 350 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 ATAT1Q5SQI0 421 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 ODR4Q5SWX8 454 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 MARCH8Q5T0T0 291 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 XRRA1Q6P2D8 792 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 ACSF2Q96CM8 615 aaPredicted RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 DIRC2Q96SL1 478 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 FAM49AQ9H0Q0 323 aaPredicted RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 TMX1Q9H3N1 280 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 ERVK-5Q9HDB9 667 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 TYW1Q9NV66 732 aaKnown RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
VPS45-210ENST00000497638 FBXL21Q9UKT6 434 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 DUSP12Q9UNI6 340 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 R4GN57 208 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 NEDD4P46934 1319 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 ZFHX4Q86UP3 3567 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 DENND4AQ7Z401 1863 aa8.68□□□□□ -1.02
VPS45-210ENST00000497638 DENND3A2RUS2 1198 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 TSPAN15O95858 294 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 RAC2P15153 192 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 MARK3P27448 753 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 LIG3P49916 1009 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 KRT17Q04695 432 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 RARS2Q5T160 578 aaKnown RBP8.67□□□□□ -1.02
VPS45-210ENST00000497638 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 SLC24A5Q71RS6 500 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 OTOP3Q7RTS5 596 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 NLRX1Q86UT6 975 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 TICAM2Q86XR7 235 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 ENAHQ8N8S7 591 aaPredicted RBP8.67□□□□□ -1.02
VPS45-210ENST00000497638 SEPT1Q8WYJ6 367 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 GLG1Q92896 1179 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 TNPO1Q92973 898 aaKnown RBP8.67□□□□□ -1.02
VPS45-210ENST00000497638 CDHR1Q96JP9 859 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 ZNF558Q96NG5 402 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 CELF4Q9BZC1 486 aaKnown RBP8.67□□□□□ -1.02
VPS45-210ENST00000497638 SMARCAD1Q9H4L7 1026 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 CWH43Q9H720 699 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 TMEM161AQ9NX61 479 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 TELO2Q9Y4R8 837 aa8.67□□□□□ -1.02
VPS45-210ENST00000497638 CACNA1IQ9P0X4 2223 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 C9IYK1 514 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 KLRF2D3W0D1 207 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 CLASP2O75122 1294 aaKnown RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 INSRRP14616 1297 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 MX1P20591 662 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 IBSPP21815 317 aaPredicted RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 ETV3P41162 512 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 IGBP1P78318 339 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 BMS1Q14692 1282 aaKnown RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 MCMDC2Q4G0Z9 681 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 FAM102BQ5T8I3 360 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 KCNT2Q6UVM3 1135 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 CCDC149Q6ZUS6 474 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 LRRC43Q8N309 656 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 NME8Q8N427 588 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 MRPL43Q8N983 215 aaKnown RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 FBXO15Q8NCQ5 510 aaPredicted RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 ABHD4Q8TB40 342 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 ZSCAN18Q8TBC5 510 aaPredicted RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 EVI5LQ96CN4 794 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 BORCS6Q96GS4 357 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 DUSP9Q99956 384 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms