RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 IMPG2Q9BZV3 1241 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 GPR88Q9GZN0 384 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 ITGA11Q9UKX5 1188 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 HES2Q9Y543 173 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 PRRC2BQ5JSZ5 2229 aaKnown RBP15.24■□□□□ 0.03
VPS26A-209ENST00000497564 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SSU72P8A0A1W2PR75 194 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 EFCAB14O75071 495 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 UPP2O95045 317 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SERPING1P05155 500 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 FERP16591 822 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SOX5P35711 763 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 MFAP3P55082 362 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 NOP14P78316 857 aaKnown RBP15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 IRF2BP2Q7Z5L9 587 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 CCDC170Q8IYT3 715 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SHC3Q92529 594 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 TATDN2Q93075 761 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 KIF12Q96FN5 646 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 KREMEN1Q96MU8 473 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
VPS26A-209ENST00000497564 CHP1Q99653 195 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 XYLT2Q9H1B5 865 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 RGS18Q9NS28 235 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 DPP3Q9NY33 737 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
VPS26A-209ENST00000497564 BZW2Q9Y6E2 419 aaKnown RBP15.24■□□□□ 0.03
VPS26A-209ENST00000497564 SOWAHDA6NJG2 315 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ESPNB1AK53 854 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 AMHP03971 560 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 CCDC172P0C7W6 258 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ITGA4P13612 1032 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 CYP3A5P20815 502 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 AKAP5P24588 427 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 MSNP26038 577 aaKnown RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ANXA13P27216 316 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ATICP31939 592 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 TRPC3Q13507 836 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ASIC2Q16515 512 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 APBB2Q92870 758 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 RAD9AQ99638 391 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ADAM2Q99965 735 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 PI4K2AQ9BTU6 479 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 APOBEC3GQ9HC16 384 aaKnown RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 ARHGAP20Q9P2F6 1191 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
VPS26A-209ENST00000497564 CUL9Q8IWT3 2517 aa15.23■□□□□ 0.03
VPS26A-209ENST00000497564 SMIM28A0A1B0GU29 152 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 LINC01553A4QN01 128 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 ENPP3O14638 875 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 INPPL1O15357 1258 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 ITGB3P05106 788 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 MYL6P60660 151 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 FAM189BP81408 668 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 CUL2Q13617 745 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 APOL6Q9BWW8 343 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 NHEJ1Q9H9Q4 299 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-209ENST00000497564 UBN1Q9NPG3 1134 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
VPS26A-209ENST00000497564 C9IYK1 514 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-209ENST00000497564 LCA5LO95447 670 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 EOMESO95936 686 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 IGFBP4P22692 258 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-209ENST00000497564 RBP5P82980 135 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 ASTE1Q2TB18 679 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-209ENST00000497564 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms