RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 KIF4AO95239 1232 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 RPA1P27694 616 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 GDI1P31150 447 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 VIPR2P41587 438 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
SRSF4-205ENST00000497015 FOXC1Q12948 553 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 HSP90AA2PQ14568 343 aaPredicted RBP10.79□□□□□ -0.68
SRSF4-205ENST00000497015 ZNF174Q15697 407 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 SOWAHCQ53LP3 525 aaPredicted RBP10.79□□□□□ -0.68
SRSF4-205ENST00000497015 LIN9Q5TKA1 542 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 TCEAL6Q6IPX3 200 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 TXNDC11Q6PKC3 985 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 WDR5BQ86VZ2 330 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 IGSF22Q8N9C0 903 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 RNF149Q8NC42 400 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 TCEAL3Q969E4 200 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 RSPRY1Q96DX4 576 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 ASB16Q96NS5 453 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
SRSF4-205ENST00000497015 IER2Q9BTL4 223 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 ANKEF1Q9NU02 776 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 PCDHB6Q9Y5E3 794 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 PIAS3Q9Y6X2 628 aa10.79□□□□□ -0.68
SRSF4-205ENST00000497015 DSPP15924 2871 aaKnown RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 VPS37CA5D8V6 355 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 B4GALT5O43286 388 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 NR1I2O75469 434 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 SLITRK3O94933 977 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 EPN2O95208 641 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 CAPNS1P04632 268 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 HSP90AA1P07900 732 aaKnown RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 ARF4P18085 180 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 HOXA6P31267 233 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 YWHABP31946 246 aaKnown RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 SOX9P48436 509 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 PXNP49023 591 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 PTENP60484 403 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 CREMQ03060 361 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 TSR1Q2NL82 804 aaKnown RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 LRRC3BQ96PB8 259 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 ZFP14Q9HCL3 533 aa10.78□□□□□ -0.68
SRSF4-205ENST00000497015 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-205ENST00000497015 SDK1Q7Z5N4 2213 aa10.77□□□□□ -0.68
SRSF4-205ENST00000497015 WDR27A2RRH5 827 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 C4orf47A7E2U8 309 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 PTGESO14684 152 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 EXTL3O43909 919 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 PTPN2P17706 415 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 PSMC3P17980 439 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 FGFR3P22607 806 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 GRIK3Q13003 919 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 DTHD1Q6ZMT9 781 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 CEP68Q76N32 757 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 C12orf50Q8NA57 414 aaPredicted RBP10.77□□□□□ -0.69
SRSF4-205ENST00000497015 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 TCP11Q8WWU5 503 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 IRF7Q92985 503 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 DYDC2Q96IM9 177 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 LOXL4Q96JB6 756 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 AK8Q96MA6 479 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 SCNM1Q9BWG6 230 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 XPNPEP1Q9NQW7 623 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 SF3B1O75533 1304 aaKnown RBP eCLIP10.77□□□□□ -0.692e-7■□□□□ 10.8
SRSF4-205ENST00000497015 IGF2RP11717 2491 aa10.77□□□□□ -0.69
SRSF4-205ENST00000497015 TCHHQ07283 1943 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 ARHGEF37A1IGU5 675 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 ASAP2O43150 1006 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 DGAT1O75907 488 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 SEC24AO95486 1093 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 SPATA31C1P0DKV0 1188 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 GJA1P17302 382 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 AXLP30530 894 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 NOVA1P51513 510 aaKnown RBP10.76□□□□□ -0.69
SRSF4-205ENST00000497015 MBTD1Q05BQ5 628 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 RESTQ13127 1097 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 TUSC3Q13454 348 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 BECN1Q14457 450 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 NOTUMQ6P988 496 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 CATSPER3Q86XQ3 398 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 PSPC1Q8WXF1 523 aaKnown RBP10.76□□□□□ -0.69
SRSF4-205ENST00000497015 CEP170P1Q96L14 293 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 NACC1Q96RE7 527 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 SNTG2Q9NY99 539 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 RGL1Q9NZL6 768 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 MTRRQ9UBK8 725 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 MTMR6Q9Y217 621 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 CDY1Q9Y6F8 540 aa10.76□□□□□ -0.69
SRSF4-205ENST00000497015 TDRD15B5MCY1 1934 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms