RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PRR18Q8N4B5 295 aa5.54□□□□□ -1.52
TRIM4-205ENST00000496896 KAT5Q92993 513 aa5.54□□□□□ -1.52
TRIM4-205ENST00000496896 RAB24Q969Q5 203 aa5.54□□□□□ -1.52
TRIM4-205ENST00000496896 Q96MF0 132 aa5.54□□□□□ -1.52
TRIM4-205ENST00000496896 NUP88Q99567 741 aaPredicted RBP5.54□□□□□ -1.52
TRIM4-205ENST00000496896 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
TRIM4-205ENST00000496896 GNL3LQ9NVN8 582 aaKnown RBP5.54□□□□□ -1.52
TRIM4-205ENST00000496896 PRAMEF33A0A0G2JMD5 474 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 NT5C1B-RDH14C9J2C7 533 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 E7ENX8 843 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 PRAMEF10O60809 474 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 ZFPL1O95159 310 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 KCNA2P16389 499 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 VCAM1P19320 739 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 MALP21145 153 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 TAP2Q03519 686 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 PIGFQ07326 219 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 FLYWCH1Q4VC44 716 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 CLNKQ7Z7G1 428 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 CPA6Q8N4T0 437 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 PTCD3Q96EY7 689 aaKnown RBP5.53□□□□□ -1.52
TRIM4-205ENST00000496896 KLHL32Q96NJ5 620 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 RIOX1Q9H6W3 641 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 ZNHIT2Q9UHR6 403 aa5.53□□□□□ -1.52
TRIM4-205ENST00000496896 ANKRD62A6NC57 917 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 PROM1O43490 865 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 NUDT3O95989 172 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 SRGNP10124 158 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 FBLP22087 321 aaKnown RBP5.52□□□□□ -1.53
TRIM4-205ENST00000496896 RPS7P62081 194 aaKnown RBP5.52□□□□□ -1.53
TRIM4-205ENST00000496896 GEN1Q17RS7 908 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 KHDC1Q4VXA5 237 aaKnown RBP5.52□□□□□ -1.53
TRIM4-205ENST00000496896 STRIP1Q5VSL9 837 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 TMPRSS9Q7Z410 1059 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 SLC44A3Q8N4M1 653 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 C3orf20Q8ND61 904 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 SCAMP4Q969E2 229 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 SMAD5Q99717 465 aaKnown RBP5.52□□□□□ -1.53
TRIM4-205ENST00000496896 TLR10Q9BXR5 811 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 CASS4Q9NQ75 786 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 INTS13Q9NVM9 706 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 CTTNBP2NLQ9P2B4 639 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 INSL6Q9Y581 213 aa5.52□□□□□ -1.53
TRIM4-205ENST00000496896 TRGV11A0A075B6L2 103 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CCDC195A0A1B0GUA6 201 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 F2RL2O00254 374 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CHEK2O96017 543 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 PDCP20941 246 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 AKAP5P24588 427 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CXCR5P32302 372 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CLK3P49761 638 aaKnown RBP5.51□□□□□ -1.53
TRIM4-205ENST00000496896 ANXA11P50995 505 aaKnown RBP5.51□□□□□ -1.53
TRIM4-205ENST00000496896 NEK2P51955 445 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 SNAPC2Q13487 334 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 HLXQ14774 488 aaPredicted RBP5.51□□□□□ -1.53
TRIM4-205ENST00000496896 ZNF169Q14929 603 aaPredicted RBP5.51□□□□□ -1.53
TRIM4-205ENST00000496896 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 USP45Q70EL2 814 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CFAP52Q8N1V2 620 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 SIMC1Q8NDZ2 872 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CAGE1Q8TC20 777 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 AIFM2Q9BRQ8 373 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 WDCPQ9H6R7 721 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 CFAP97Q9P2B7 532 aa5.51□□□□□ -1.53
TRIM4-205ENST00000496896 KIAA0355O15063 1070 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 GNAI3P08754 354 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 POU2F2P09086 479 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 SMARCA1P28370 1054 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 HK3P52790 923 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 GNAI1P63096 354 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 TCF15Q12870 199 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 DYRK1AQ13627 763 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.5□□□□□ -1.53
TRIM4-205ENST00000496896 ZBTB46Q86UZ6 589 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 FAM90A1Q86YD7 464 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 TMIEQ8NEW7 156 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 SSH3Q8TE77 659 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 PDLIM2Q96JY6 352 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 FAM167AQ96KS9 214 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
TRIM4-205ENST00000496896 GPR35Q9HC97 309 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 CDYLQ9Y232 598 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.5□□□□□ -1.53
TRIM4-205ENST00000496896 COX11Q9Y6N1 276 aa5.5□□□□□ -1.53
TRIM4-205ENST00000496896 SPATA31A3Q5VYP0 1347 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 SUN1O94901 812 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 PRDX5P30044 214 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 FOLR3P41439 243 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 RARRES1P49788 294 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 SIM1P81133 766 aaPredicted RBP5.49□□□□□ -1.53
TRIM4-205ENST00000496896 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
TRIM4-205ENST00000496896 NOGQ13253 232 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 NBPF8Q3BBV2 869 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 VWA1Q6PCB0 445 aa5.49□□□□□ -1.53
TRIM4-205ENST00000496896 MICALCLQ6ZW33 695 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms