RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MYL6P60660 151 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 TRPC3Q13507 836 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SCARA3Q6AZY7 606 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 FBXO25Q8TCJ0 367 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF606Q8WXB4 792 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SLCO2A1Q92959 643 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 FAM129AQ9BZQ8 928 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 INO80BQ9C086 356 aaPredicted RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PTPRHQ9HD43 1115 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PDGFCQ9NRA1 345 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 MTRF1LQ9UGC7 380 aaKnown RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ASAP2O43150 1006 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 C22orf31O95567 290 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
GARNL3-220ENST00000496711 TNNC2P02585 160 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 GJB1P08034 283 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 YBX3P16989 372 aaKnown RBP eCLIP13.88□□□□□ -0.19
GARNL3-220ENST00000496711 MAN1A1P33908 653 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 GJA5P36382 358 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 ATP1A2P50993 1020 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 CLCN3P51790 818 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 EIF3BP55884 814 aaKnown RBP13.88□□□□□ -0.19
GARNL3-220ENST00000496711 TFAMQ00059 246 aaKnown RBP13.88□□□□□ -0.19
GARNL3-220ENST00000496711 MBTD1Q05BQ5 628 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 AGBL2Q5U5Z8 902 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 CENPHQ9H3R5 247 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 PARVAQ9NVD7 372 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
GARNL3-220ENST00000496711 CITO14578 2027 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 B4GALT5O43286 388 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CALB1P05937 261 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CD58P19256 250 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 MMP8P22894 467 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PMS2P54278 862 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PDCLQ13371 301 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PPP1R7Q15435 360 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF699Q32M78 642 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ARFGAP2Q8N6H7 521 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CDT1Q9H211 546 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 EFCC1Q9HA90 598 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 TNFSF13BQ9Y275 285 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 TLR3O15455 904 aaKnown RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 B4GALT4O60513 344 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 IL18RAPO95256 599 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 NUDT17P0C025 328 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CYP2C8P10632 490 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PHKA2P46019 1235 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 KCNJ1P48048 391 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 YWHAEP62258 255 aaKnown RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CCNA1P78396 465 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 KRT71Q3SY84 523 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 EEF1DP3Q658K8 133 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 TTC19Q6DKK2 380 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 FOXR1Q6PIV2 292 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 CCDC50Q8IVM0 306 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 KATNAL2Q8IYT4 538 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 FEZF2Q8TBJ5 459 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 C1orf54Q8WWF1 131 aa13.87□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PABPC3Q9H361 631 aaKnown RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 PRMT7Q9NVM4 692 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-220ENST00000496711 RALGAPA2Q2PPJ7 1873 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 KAT6AQ92794 2004 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 LGALS2P05162 132 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
GARNL3-220ENST00000496711 ASPAP45381 313 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 TAS2R40P59535 323 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 OSTNP61366 133 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 KRT17Q04695 432 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 SCARA5Q6ZMJ2 495 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-220ENST00000496711 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 CEP120Q8N960 986 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 GRK7Q8WTQ7 553 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 ART4Q93070 314 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 ZBTB10Q96DT7 871 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms