RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 LMBRD2Q68DH5 695 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TTI2Q6NXR4 508 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 SCN4BQ8IWT1 228 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TOP6BLQ8N6T0 577 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 CDCA3Q99618 268 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 INTS2Q9H0H0 1204 aaKnown RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 SEMA6BQ9H3T3 888 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 PCDHB5Q9Y5E4 795 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 GTPBP10A4D1E9 387 aaKnown RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 PPP1R37O75864 691 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 GLUD1P00367 558 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 CD58P19256 250 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 CASP5P51878 434 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 SGO2Q562F6 1265 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 VPS52Q8N1B4 723 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 FGF19O95750 216 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 EPHB4P54760 987 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 GSE1Q14687 1217 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 IFI16Q16666 785 aaKnown RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 PPM1LQ5SGD2 360 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 UNC93AQ86WB7 457 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 SIX6OS1Q8N1H7 587 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 CPLX3Q8WVH0 158 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 CRACR2AQ9BSW2 395 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TLR9Q9NR96 1032 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 LZTS1Q9Y250 596 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TTC26A0AVF1 554 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 LGALS16A8MUM7 142 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 TGFB1I1O43294 461 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 DNAJB2P25686 324 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 HOXA11P31270 313 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 EEF2KMTQ96G04 330 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 ZNF512Q96ME7 567 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 KCTD10Q9H3F6 313 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 FAM207AQ9NSI2 230 aaPredicted RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 NRP1O14786 923 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 DGKIO75912 1065 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 AKAP3O75969 853 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 FGF18O76093 207 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 CA3P07451 260 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 NDUFV1P49821 464 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 CYP27A1Q02318 531 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 SLC10A6Q3KNW5 377 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 SV2AQ7L0J3 742 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 C2orf15Q8WU43 125 aaKnown RBP9.21□□□□□ -0.93
U2AF1-212ENST00000496462 CASP10Q92851 521 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 WNT8BQ93098 351 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM11Q96F44 468 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 TMEM51Q9NW97 253 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 UXTQ9UBK9 157 aaPredicted RBP9.21□□□□□ -0.93
U2AF1-212ENST00000496462 USP20Q9Y2K6 914 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 PAXBP1Q9Y5B6 917 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 CUL9Q8IWT3 2517 aa9.21□□□□□ -0.93
U2AF1-212ENST00000496462 THAP12O43422 761 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 NFICP08651 508 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 DEFB103AP81534 67 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 KRT31Q15323 416 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 MGAT5BQ3V5L5 792 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 AGMOQ6ZNB7 445 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 ARHGAP18Q8N392 663 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 CEP120Q8N960 986 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 STKLD1Q8NE28 680 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 TCF25Q9BQ70 676 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 SLITRK6Q9H5Y7 841 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 SAMSN1Q9NSI8 373 aaKnown RBP9.21□□□□□ -0.94
U2AF1-212ENST00000496462 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.94
U2AF1-212ENST00000496462 MAFFQ9ULX9 164 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 GRXCR1A8MXD5 290 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 CAPN9O14815 690 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 POLR2FP61218 127 aaKnown RBP9.21□□□□□ -0.94
U2AF1-212ENST00000496462 TRIM72Q6ZMU5 477 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 C11orf57Q6ZUT1 292 aaPredicted RBP9.21□□□□□ -0.94
U2AF1-212ENST00000496462 IGSF21Q96ID5 467 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 CCDC42Q96M95 316 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 RIPOR3Q96MK2 946 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 NRDE2Q9H7Z3 1164 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 DNAJC12Q9UKB3 198 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 CDH9Q9ULB4 789 aa9.21□□□□□ -0.94
U2AF1-212ENST00000496462 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SOD2P04179 222 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 GALTP07902 379 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 GRIK1P39086 918 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TNFSF9P41273 254 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 KCNA1Q09470 495 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 AMHR2Q16671 573 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 PLPP4Q5VZY2 271 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms