RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ODC1P11926 461 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 PAX3P23760 479 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 HOXA9P31269 272 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 HOXD13P35453 343 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 YWHAHQ04917 246 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-211ENST00000496215 MRPL58Q14197 206 aaKnown RBP22.33■■□□□ 1.17
COL9A2-211ENST00000496215 OTOP3Q7RTS5 596 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 NELFCDQ8IXH7 590 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 SCFD1Q8WVM8 642 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 EDAQ92838 391 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 ACSF2Q96CM8 615 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-211ENST00000496215 WDR6Q9NNW5 1121 aaKnown RBP22.33■■□□□ 1.17
COL9A2-211ENST00000496215 SLC39A2Q9NP94 309 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 DPP3Q9NY33 737 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 FBXL5Q9UKA1 691 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 MYO10Q9HD67 2058 aa22.33■■□□□ 1.17
COL9A2-211ENST00000496215 DOCK8Q8NF50 2099 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 ANO9A1A5B4 782 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 PRR33A8MZF0 331 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 TBC1D4O60343 1298 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 ARPP19P56211 112 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 LILRA4P59901 499 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 ZXDAP98168 799 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 PTPN21Q16825 1174 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 BMT2Q1RMZ1 405 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 USP37Q86T82 979 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 SMOC2Q9H3U7 446 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 AGPAT3Q9NRZ7 376 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 HSPBP1Q9NZL4 362 aa22.32■■□□□ 1.16
COL9A2-211ENST00000496215 ARHGEF37A1IGU5 675 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 WDR27A2RRH5 827 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 PIRO00625 290 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 KLRC4O43908 158 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 XYLBO75191 536 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 CPB1P15086 417 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 WNT7BP56706 349 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 TFAMQ00059 246 aaKnown RBP22.31■■□□□ 1.16
COL9A2-211ENST00000496215 HS2ST1Q7LGA3 356 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 ZDHHC14Q8IZN3 488 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 PLCD3Q8N3E9 789 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 ZNF461Q8TAF7 563 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 ZNF560Q96MR9 790 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 GOLPH3LQ9H4A5 285 aa22.31■■□□□ 1.16
COL9A2-211ENST00000496215 TIMM13Q9Y5L4 95 aaPredicted RBP22.31■■□□□ 1.16
COL9A2-211ENST00000496215 ASGR2P07307 311 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 TYMPP19971 482 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 TAF6P49848 677 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 SNRPFP62306 86 aaKnown RBP22.3■■□□□ 1.16
COL9A2-211ENST00000496215 UVSSAQ2YD98 709 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 HFE2Q6ZVN8 426 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 RTL10Q7L3V2 364 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 CACTINQ8WUQ7 758 aaKnown RBP22.3■■□□□ 1.16
COL9A2-211ENST00000496215 SENP8Q96LD8 212 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 OXCT2Q9BYC2 517 aaPredicted RBP22.3■■□□□ 1.16
COL9A2-211ENST00000496215 KIAA1586Q9HCI6 787 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 POLIQ9UNA4 740 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 NOTCH4Q99466 2003 aa22.3■■□□□ 1.16
COL9A2-211ENST00000496215 ZNF233A6NK53 670 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 PRRG1O14668 218 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 SPTLC1O15269 473 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 CCL16O15467 120 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 TGFB1I1O43294 461 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 ABLIM3O94929 683 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 OAZ2O95190 189 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 POU2F2P09086 479 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 TMEM191BP0C7N4 346 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 ELF1P32519 619 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 PSMD2Q13200 908 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 SV2CQ496J9 727 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 KMT5BQ4FZB7 885 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 TPGS2Q68CL5 300 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 OVOS1Q6IE37 1185 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 TRIM67Q6ZTA4 783 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 CBWD2Q8IUF1 395 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 PDE11AQ9HCR9 933 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 CGNQ9P2M7 1197 aaKnown RBP22.29■■□□□ 1.16
COL9A2-211ENST00000496215 SCN1AP35498 2009 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 ZNF318Q5VUA4 2279 aa22.29■■□□□ 1.16
COL9A2-211ENST00000496215 GOLGA6L4A6NEF3 574 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 ITGB3P05106 788 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 ATF2P15336 505 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 GBP2P32456 591 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-211ENST00000496215 PNPLA4P41247 253 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 CYP2J2P51589 502 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 MTMR3Q13615 1198 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 KRBA2Q6ZNG9 492 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 GET4Q7L5D6 327 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-211ENST00000496215 GRASPQ7Z6J2 395 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-211ENST00000496215 KIAA0895Q8NCT3 520 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 CCDC47Q96A33 483 aaKnown RBP22.28■■□□□ 1.16
COL9A2-211ENST00000496215 ASIC4Q96FT7 647 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 MTMR12Q9C0I1 747 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 CYP4F11Q9HBI6 524 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 LIMD1Q9UGP4 676 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 ITGA11Q9UKX5 1188 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 DSEQ9UL01 958 aa22.28■■□□□ 1.16
COL9A2-211ENST00000496215 OR6C75A6NL08 312 aa22.27■■□□□ 1.16
COL9A2-211ENST00000496215 LRG1P02750 347 aa22.27■■□□□ 1.16
COL9A2-211ENST00000496215 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
COL9A2-211ENST00000496215 PRR29P0C7W0 189 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms