RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LRRC53A6NM62 1247 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 EML1O00423 815 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 SLC16A3O15427 465 aaKnown RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 VAV2P52735 878 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 OSTNP61366 133 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 ITGB3BPQ13352 177 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 LEMD2Q8NC56 503 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 DHX38Q92620 1227 aaKnown RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 SYN2Q92777 582 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 HERC2P3Q9BVR0 1158 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 EDEM3Q9BZQ6 932 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 TRAF3IP3Q9Y228 551 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 ARID2Q68CP9 1835 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 MBLAC1A4D2B0 266 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 RASIP1Q5U651 963 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 SFR1Q86XK3 245 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 NELFCDQ8IXH7 590 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 CYP2W1Q8TAV3 490 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 GOLGA5Q8TBA6 731 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 NXPE3Q969Y0 559 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 TTPALQ9BTX7 342 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 USP15Q9Y4E8 981 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 A0A0G2JMZ2 1700 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 ZMYM2Q9UBW7 1377 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 INPPL1O15357 1258 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 MYBP10242 640 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 CASP5P51878 434 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 KIAA1328Q86T90 577 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 NEK11Q8NG66 645 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 HDAC7Q8WUI4 952 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 KIF12Q96FN5 646 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 CPB2Q96IY4 423 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 MYO6Q9UM54 1294 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 UBQLN1Q9UMX0 589 aaKnown RBP9.15□□□□□ -0.95
VPS13B-206ENST00000496144 GUCA1BQ9UMX6 200 aa9.15□□□□□ -0.95
VPS13B-206ENST00000496144 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PER2O15055 1255 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 GRM6O15303 877 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 NOL4O94818 638 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 HOXD13P35453 343 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TUBB4BP68371 445 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TFF2Q03403 129 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 NFIL3Q16649 462 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 HERC4Q5GLZ8 1057 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PCDHA13Q9Y5I0 950 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 EIF3DO15371 548 aaKnown RBP eCLIP9.14□□□□□ -0.953e-6■■□□□ 13.7
VPS13B-206ENST00000496144 HUS1O60921 280 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 BFSP1Q12934 665 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 KNOP1Q1ED39 458 aaKnown RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 CCDC122Q5T0U0 273 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 DCLRE1AQ6PJP8 1040 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 FRMD5Q7Z6J6 570 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 LSM14BQ9BX40 385 aaKnown RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TMEM206Q9H813 350 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PTPRFP10586 1907 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TMEM221A6NGB7 291 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 M0R296 226 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 ATG7O95352 703 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 TNNC1P63316 161 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PAPD7Q5XG87 772 aaKnown RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 POMGNT1Q8WZA1 660 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 FAM207AQ9NSI2 230 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 ARHGAP20Q9P2F6 1191 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 LAMTOR5O43504 91 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 KRT86O43790 486 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 SLITRK3O94933 977 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 HNRNPA1P09651 372 aaKnown RBP eCLIP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 NUBP1P53384 320 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 CBX2Q14781 532 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 SV2CQ496J9 727 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 HSD17B14Q9BPX1 270 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 GPR88Q9GZN0 384 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 MAN1C1Q9NR34 630 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.14□□□□□ -0.95
VPS13B-206ENST00000496144 SORCS3Q9UPU3 1222 aa9.14□□□□□ -0.95
VPS13B-206ENST00000496144 ZNF263O14978 683 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PLEKP08567 350 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MLH1P40692 756 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 LMBRD2Q68DH5 695 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 SDE2Q6IQ49 451 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 C16orf59Q7L2K0 433 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MSANTD4Q8NCY6 345 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MMRN2Q9H8L6 949 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PARVGQ9HBI0 331 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 CYP4F11Q9HBI6 524 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ASAH2Q9NR71 780 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 TFR2Q9UP52 801 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RLFQ13129 1914 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms