RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 OR14A2Q96R54 314 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 LSM14BQ9BX40 385 aaKnown RBP6.61□□□□□ -1.35
SSR3-208ENST00000496050 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 GPR35Q9HC97 309 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 COL20A1Q9P218 1284 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 SRRDQ9UH36 339 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 APOL1O14791 398 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 AGFG2O95081 481 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 CHEK2O96017 543 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 FOSP01100 380 aaPredicted RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 POU6F2P78424 691 aaPredicted RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 DUSP8Q13202 625 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 CTBP1Q13363 440 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 ELAVL1Q15717 326 aaKnown RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 ARL13BQ3SXY8 428 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 MDGA1Q8NFP4 955 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 TBC1D15Q8TC07 691 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 GNRHR2Q96P88 292 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 PPCSQ9HAB8 311 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
SSR3-208ENST00000496050 FBXO34Q9NWN3 711 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 PLEKHM1Q9Y4G2 1056 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 CEP83Q9Y592 693 aa6.6□□□□□ -1.35
SSR3-208ENST00000496050 DRGXA6NNA5 263 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 ZNF785A8K8V0 405 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 F8W8V4 182 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 NCK2O43639 380 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 C8AP07357 584 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 CFPP27918 469 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 HHEXQ03014 270 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 HIBCHQ6NVY1 386 aaPredicted RBP6.59□□□□□ -1.35
SSR3-208ENST00000496050 MED25Q71SY5 747 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 BEND5Q7L4P6 421 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 ELOA2Q8IYF1 753 aaPredicted RBP6.59□□□□□ -1.35
SSR3-208ENST00000496050 ANKRD35Q8N283 1001 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 D2HGDHQ8N465 521 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 SLC17A8Q8NDX2 589 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 REXO4Q9GZR2 422 aaKnown RBP6.59□□□□□ -1.35
SSR3-208ENST00000496050 SMURF2Q9HAU4 748 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 SLC45A2Q9UMX9 530 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 SH3BP1Q9Y3L3 701 aa6.59□□□□□ -1.35
SSR3-208ENST00000496050 TRIM13O60858 407 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 RAD17O75943 681 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 CKBP12277 381 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 TSHRP16473 764 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 ABCB4P21439 1286 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 PPM1AP35813 382 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 TECP42680 631 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 ZNF135P52742 658 aaPredicted RBP6.58□□□□□ -1.36
SSR3-208ENST00000496050 MAPK10P53779 464 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
SSR3-208ENST00000496050 FOXL1Q12952 345 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 LIX1LQ8IVB5 337 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 SLC15A4Q8N697 577 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 DNAJC5GQ8N7S2 189 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 RNF152Q8N8N0 203 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 OR52N2Q8NGI0 321 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 POF1BQ8WVV4 589 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 IPCEF1Q8WWN9 437 aaPredicted RBP6.58□□□□□ -1.36
SSR3-208ENST00000496050 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 IMPG2Q9BZV3 1241 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 MEGF9Q9H1U4 602 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 GPRC5BQ9NZH0 403 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 DUSP10Q9Y6W6 482 aa6.58□□□□□ -1.36
SSR3-208ENST00000496050 KLRG2A4D1S0 409 aaPredicted RBP6.57□□□□□ -1.36
SSR3-208ENST00000496050 CDHR4A6H8M9 788 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 THAP12O43422 761 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 CREB3O43889 395 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 DNAJB5O75953 348 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 UNC5CO95185 931 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 ANXA2P07355 339 aaKnown RBP6.57□□□□□ -1.36
SSR3-208ENST00000496050 GRPP07492 148 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
SSR3-208ENST00000496050 BMP7P18075 431 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 SLC6A2P23975 617 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 CNR2P34972 360 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 MSX2P35548 267 aaPredicted RBP6.57□□□□□ -1.36
SSR3-208ENST00000496050 TRAPPC10P48553 1259 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 TNFAIP2Q03169 654 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 PDCD2Q16342 344 aaPredicted RBP6.57□□□□□ -1.36
SSR3-208ENST00000496050 TCTN3Q6NUS6 607 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 ERAP2Q6P179 960 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 PGBD2Q6P3X8 592 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 RNF44Q7L0R7 432 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 MICU3Q86XE3 530 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 SYTL1Q8IYJ3 562 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 MPP5Q8N3R9 675 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 RNF169Q8NCN4 708 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 NUP133Q8WUM0 1156 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 KIAA1191Q96A73 305 aa6.57□□□□□ -1.36
SSR3-208ENST00000496050 PHACTR3Q96KR7 559 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms