RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PI15O43692 258 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 CPB1P15086 417 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 TYMPP19971 482 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 RFX1P22670 979 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 LILRA4P59901 499 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 GPC5P78333 572 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 TMEM132DQ14C87 1099 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
PTPRF-214ENST00000496043 CYP4A22Q5TCH4 519 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 RNF19BQ6ZMZ0 732 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 TMEM130Q8N3G9 435 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 GPR152Q8TDT2 470 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 FGF14Q92915 247 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 MCRS1Q96EZ8 462 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 SENP8Q96LD8 212 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 GDE1Q9NZC3 331 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 TBC1D7Q9P0N9 293 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 INSL5Q9Y5Q6 135 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 VWA8A3KMH1 1905 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 CITO14578 2027 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 TISP43B9A030 160 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 PIRO00625 290 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 PPP6R2O75170 966 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 PPP1R37O75864 691 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 MICAL2O94851 1124 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 GCNT3O95395 438 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 LDHAP00338 332 aaKnown RBP13.81□□□□□ -0.2
PTPRF-214ENST00000496043 HSP90AA1P07900 732 aaKnown RBP13.81□□□□□ -0.2
PTPRF-214ENST00000496043 ADSSP30520 456 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 ALCAMQ13740 583 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 CWF19L1Q69YN2 538 aaKnown RBP13.81□□□□□ -0.2
PTPRF-214ENST00000496043 OVOS1Q6IE37 1185 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 NPAS3Q8IXF0 933 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 PDILTQ8N807 584 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 ING5Q8WYH8 240 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 SHDQ96IW2 340 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 OLFML3Q9NRN5 406 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 C2CD2Q9Y426 696 aa13.81□□□□□ -0.2
PTPRF-214ENST00000496043 A0A087X0B3 334 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
PTPRF-214ENST00000496043 PPEF2O14830 753 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 CUTAO60888 179 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 IL18RAPO95256 599 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 NFICP08651 508 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 ODC1P11926 461 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 AMPD3Q01432 767 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 KCNA1Q09470 495 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 TWF1Q12792 350 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 GPR17Q13304 367 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 MYBPC2Q14324 1141 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 PHLDB3Q6NSJ2 640 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
PTPRF-214ENST00000496043 PDZD4Q76G19 769 aaPredicted RBP13.8□□□□□ -0.2
PTPRF-214ENST00000496043 METTL23Q86XA0 190 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 NT5DC4Q86YG4 428 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 IKZF4Q9H2S9 585 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 DSEQ9UL01 958 aa13.8□□□□□ -0.2
PTPRF-214ENST00000496043 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 SPTLC1O15269 473 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 ECI2O75521 394 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 YEATS4O95619 227 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 GARTP22102 1010 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 ALDH1A3P47895 512 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 PFKPQ01813 784 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 DUSP4Q13115 394 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 PLD1Q13393 1074 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 SLC5A9Q2M3M2 681 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 SLC44A4Q53GD3 710 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
PTPRF-214ENST00000496043 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 LEMD2Q8NC56 503 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 CACTINQ8WUQ7 758 aaKnown RBP13.79□□□□□ -0.2
PTPRF-214ENST00000496043 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
PTPRF-214ENST00000496043 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 FAM213AQ9BRX8 229 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 CUEDC2Q9H467 287 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 ARHGEF3Q9NR81 526 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 CEP72Q9P209 647 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 SIT1Q9Y3P8 196 aa13.79□□□□□ -0.2
PTPRF-214ENST00000496043 DOCK6Q96HP0 2047 aa13.78□□□□□ -0.2
PTPRF-214ENST00000496043 DOCK8Q8NF50 2099 aa13.78□□□□□ -0.2
PTPRF-214ENST00000496043 CYB561D2O14569 222 aa13.78□□□□□ -0.2
PTPRF-214ENST00000496043 CYP11A1P05108 521 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms