RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 IRAK3Q9Y616 596 aa18.42■□□□□ 0.54
HDAC6-235ENST00000495515 MTCH2Q9Y6C9 303 aa18.42■□□□□ 0.54
HDAC6-235ENST00000495515 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
HDAC6-235ENST00000495515 M0QZQ0 153 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 N4BP1O75113 896 aaKnown RBP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 CLSTN1O94985 981 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 ODC1P11926 461 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 FGFR3P22607 806 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 MXI1P50539 228 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 CETN1Q12798 172 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 NCOA4Q13772 614 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 C1orf220Q5T0J3 134 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 TDRD10Q5VZ19 366 aaKnown RBP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 MRPL43Q8N983 215 aaKnown RBP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 CCDC150Q8NCX0 1101 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 CXorf38Q8TB03 319 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 RIN2Q8WYP3 895 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 SLC35C1Q96A29 364 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 FAM84AQ96KN4 292 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 CNOT6LQ96LI5 555 aaKnown RBP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 BPIFA3Q9BQP9 254 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 EMILIN2Q9BXX0 1053 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 IMPG2Q9BZV3 1241 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 MMRN2Q9H8L6 949 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 DSEQ9UL01 958 aa18.41■□□□□ 0.54
HDAC6-235ENST00000495515 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC6-235ENST00000495515 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-235ENST00000495515 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 H7C4K7 107 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 I3L4J1 428 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 STAU1O95793 577 aaKnown RBP18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TYMPP19971 482 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 IRS1P35568 1242 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 PIK3CAP42336 1068 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 MTIF2P46199 727 aaKnown RBP18.4■□□□□ 0.54
HDAC6-235ENST00000495515 PPP3CAQ08209 521 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 SGSM1Q2NKQ1 1148 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 KIAA0319Q5VV43 1072 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 ANKS3Q6ZW76 656 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TAS1R1Q7RTX1 841 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 METTL23Q86XA0 190 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TRIM59Q8IWR1 403 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TMEM130Q8N3G9 435 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 PIK3R5Q8WYR1 880 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TAF4BQ92750 862 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 SENP8Q96LD8 212 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 FUCA2Q9BTY2 467 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 GDAP2Q9NXN4 497 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 TRIP11Q15643 1979 aa18.4■□□□□ 0.54
HDAC6-235ENST00000495515 PDCD11Q14690 1871 aaKnown RBP18.39■□□□□ 0.54
HDAC6-235ENST00000495515 C2orf71A6NGG8 1288 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 C2CD2LO14523 706 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 CYB561D2O14569 222 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 SPTLC1O15269 473 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 HUS1O60921 280 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 CST3P01034 146 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 P4HA1P13674 534 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 IGFBP6P24592 240 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 EEF1GP26641 437 aaKnown RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 TKTP29401 623 aaKnown RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 ZNF165P49910 485 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 RTP2Q5QGT7 225 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 C15orf39Q6ZRI6 1047 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 ANKRD20A12PQ8NF67 263 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 CDCA3Q99618 268 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 OXCT2Q9BYC2 517 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 TLE6Q9H808 572 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 SNX9Q9Y5X1 595 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
HDAC6-235ENST00000495515 ANK1P16157 1881 aa18.39■□□□□ 0.53
HDAC6-235ENST00000495515 CHD9Q3L8U1 2897 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 BECN2A8MW95 431 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 P4HA2O15460 535 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 HLA-DRAP01903 254 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-235ENST00000495515 MYL6P60660 151 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 TNNC1P63316 161 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-235ENST00000495515 PSMD5Q16401 504 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 VARS2Q5ST30 1063 aaKnown RBP18.38■□□□□ 0.53
HDAC6-235ENST00000495515 ZNF280DQ6N043 979 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 MICALL1Q8N3F8 863 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 FBXL13Q8NEE6 735 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 AUTS2Q8WXX7 1259 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 B3GALT6Q96L58 329 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 RXFP1Q9HBX9 757 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 FNIP2Q9P278 1114 aa18.38■□□□□ 0.53
HDAC6-235ENST00000495515 HIDE1A8MVS5 230 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 KCNJ18B7U540 433 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 PMM2O15305 246 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 NCK2O43639 380 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 LILRB3O75022 631 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 VNN1O95497 513 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
HDAC6-235ENST00000495515 ADH1AP07327 375 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms