RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 RNF19AQ9NV58 838 aa12.35□□□□□ -0.43
SLC13A3-211ENST00000495082 ARHGAP20Q9P2F6 1191 aa12.35□□□□□ -0.43
SLC13A3-211ENST00000495082 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
SLC13A3-211ENST00000495082 TET1Q8NFU7 2136 aa12.35□□□□□ -0.43
SLC13A3-211ENST00000495082 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 PPEF2O14830 753 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 EVI5O60447 810 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 EFCAB14O75071 495 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 GFPT2O94808 682 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 ANXA13P27216 316 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 RPL9P32969 192 aaKnown RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 NOMO2Q5JPE7 1267 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 CCDC170Q8IYT3 715 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 CYP3A43Q9HB55 503 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 SCN5AQ14524 2016 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 PNMA6AP0CW24 399 aaPredicted RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 FGFR1P11362 822 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 PAX3P23760 479 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 TUSC3Q13454 348 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 UROC1Q96N76 676 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 HTATIP2Q9BUP3 242 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 NHEJ1Q9H9Q4 299 aaPredicted RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
SLC13A3-211ENST00000495082 TRIP11Q15643 1979 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 CLSTN1O94985 981 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 POMCP01189 267 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 TAF6P49848 677 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 TNNC1P63316 161 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 ARID5AQ03989 594 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 DSC1Q08554 894 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 ASTE1Q2TB18 679 aaPredicted RBP12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 SV2CQ496J9 727 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 TTC39CQ8N584 583 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 HAUS4Q9H6D7 363 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 CISHQ9NSE2 258 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 POLIQ9UNA4 740 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 TTC3P53804 2025 aa12.33□□□□□ -0.44
SLC13A3-211ENST00000495082 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 PODXLO00592 558 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 PLEKP08567 350 aaPredicted RBP12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 ZNF132P52740 706 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 BPIFB4P59827 614 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 LILRA4P59901 499 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 PTK2Q05397 1052 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.442e-11■□□□□ 10.2
SLC13A3-211ENST00000495082 UPP1Q16831 310 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 EPN1Q9Y6I3 576 aaPredicted RBP12.32□□□□□ -0.44
SLC13A3-211ENST00000495082 SPTLC1O15269 473 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CYP26A1O43174 497 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 NDUFA10O95299 355 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 WEE2P0C1S8 567 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 KRT5P13647 590 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CYLC1P35663 651 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 USP8P40818 1118 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 AARSP49588 968 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CLCNKBP51801 687 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 INCA1Q0VD86 236 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 MTF1Q14872 753 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.31□□□□□ -0.441e-8■□□□□ 11.3
SLC13A3-211ENST00000495082 ZNF571Q7Z3V5 609 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 MRPL9Q9BYD2 267 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 SDCBP2Q9H190 292 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 KCND1Q9NSA2 647 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 NOCTQ9UK39 431 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 LCA5LO95447 670 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 AMHP03971 560 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 CYP11B1P15538 503 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms