RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 SERINC5Q86VE9 423 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 FAM228AQ86W67 206 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 RHOT2Q8IXI1 618 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 CXorf38Q8TB03 319 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 UBXN4Q92575 508 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 ARHGEF26Q96DR7 871 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 TLR10Q9BXR5 811 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-245ENST00000494862 THAP2Q9H0W7 228 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 CISHQ9NSE2 258 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 DPP3Q9NY33 737 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
HDLBP-245ENST00000494862 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 MTA2O94776 668 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 CYP1A1P04798 512 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 CYP1A2P05177 515 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 UNGP13051 313 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 P4HA1P13674 534 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 POLR2BP30876 1174 aaKnown RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 ASPAP45381 313 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 MGAT3Q09327 533 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 ZBTB6Q15916 424 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 ALKAL1Q6UXT8 129 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 GOLGA1Q92805 767 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 OSBPL9Q96SU4 736 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 TSEN34Q9BSV6 310 aaKnown RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 GTF3C4Q9UKN8 822 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 POLIQ9UNA4 740 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 AGAP1Q9UPQ3 857 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 NOC2LQ9Y3T9 749 aaKnown RBP12.28□□□□□ -0.44
HDLBP-245ENST00000494862 GRIN2DO15399 1336 aa12.28□□□□□ -0.44
HDLBP-245ENST00000494862 THAP12O43422 761 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 NCK2O43639 380 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 SRGAP2O75044 1071 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 RECQL4O94761 1208 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 FTCDO95954 541 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 CALCAP01258 141 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 INHAP05111 366 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 WEE2P0C1S8 567 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 HSPA1AP0DMV8 641 aaKnown RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 HSPA1BP0DMV9 641 aaKnown RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 RPS6KA1Q15418 735 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 XKR4Q5GH76 650 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 SCARA5Q6ZMJ2 495 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 TTC39CQ8N584 583 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 BEST2Q8NFU1 509 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF296Q8WUU4 475 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 UBE2Q2Q8WVN8 375 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 ANKRD7Q92527 254 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 WNT8BQ93098 351 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 TRIM11Q96F44 468 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 HPDLQ96IR7 371 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 SENP6Q9GZR1 1112 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 NXF3Q9H4D5 531 aaKnown RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 ABCB6Q9NP58 842 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 CHST12Q9NRB3 414 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 NXF1Q9UBU9 619 aaKnown RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
HDLBP-245ENST00000494862 V9GYY5 206 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-245ENST00000494862 ANK1P16157 1881 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 MOXD2PA6NHM9 499 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CES2O00748 559 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 RPS6KA5O75582 802 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 KIF4AO95239 1232 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CHRNA1P02708 482 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 MYBL1P10243 752 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 KCNE1P15382 129 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CD58P19256 250 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ACLYP53396 1101 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CENPCQ03188 943 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 PTK7Q13308 1070 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ITGA7Q13683 1181 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ELF2Q15723 593 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 PTGISQ16647 500 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ERCC6LQ2NKX8 1250 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 WDR72Q3MJ13 1102 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CREG2Q8IUH2 290 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms