RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 HDAC1Q13547 482 aaPredicted RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 METTL24Q5JXM2 366 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 SPTY2D1Q68D10 685 aaPredicted RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 DRICH1Q6PGQ1 229 aaPredicted RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 MED25Q71SY5 747 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 COL23A1Q86Y22 540 aaPredicted RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 FAM90A1Q86YD7 464 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 OR52N2Q8NGI0 321 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 NEU4Q8WWR8 484 aaPredicted RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 LRTOMTQ8WZ04 291 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 PGBD4Q96DM1 585 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 PLEKHG4BQ96PX9 1271 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 C1orf43Q9BWL3 253 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 GPR87Q9BY21 358 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 BHMT2Q9H2M3 363 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 BRD9Q9H8M2 597 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 ZMAT3Q9HA38 289 aaKnown RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 FBXO34Q9NWN3 711 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 PIH1D1Q9NWS0 290 aaKnown RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 USP25Q9UHP3 1055 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 CDHR4A6H8M9 788 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 DRGXA6NNA5 263 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 APAF1O14727 1248 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 NARSO43776 548 aaKnown RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 PQBP1O60828 265 aaKnown RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 AHSGP02765 367 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 SLC6A4P31645 630 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 NOMO3P69849 1222 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 DGCR2P98153 550 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 CRHR2Q13324 411 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 VPS72Q15906 364 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 UTP14CQ5TAP6 766 aaKnown RBP3.44□□□□□ -1.86
LRIF1-203ENST00000494675 IL31Q6EBC2 164 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 SWSAP1Q6NVH7 229 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 FITM2Q8N6M3 262 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 OR10H5Q8NGA6 315 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 TBC1D15Q8TC07 691 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 MNTQ99583 582 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 SLC52A1Q9NWF4 448 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 FAM30AQ9NZY2 134 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 JKAMPQ9P055 326 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 CFAP97Q9P2B7 532 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 TNFRSF18Q9Y5U5 241 aa3.44□□□□□ -1.86
LRIF1-203ENST00000494675 A0A087X1B8 175 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 ANO9A1A5B4 782 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 GOLGA6L6A8MZA4 724 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 SLC43A1O75387 559 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 GNAI2P04899 355 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 ITGB1P05556 798 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 GJB1P08034 283 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 KITP10721 976 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 SLC6A2P23975 617 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 SLC7A1P30825 629 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 KCNJ5P48544 419 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 CHN2P52757 468 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 PSMC1P62191 440 aaKnown RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 EXOSC9Q06265 439 aaKnown RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 SEMA5AQ13591 1074 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 CNGB1Q14028 1251 aaPredicted RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 POLD3Q15054 466 aaPredicted RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 DCAF17Q5H9S7 520 aaPredicted RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 SYCP2LQ5T4T6 812 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 APOA5Q6Q788 366 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF365Q70YC5 407 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 CELF5Q8N6W0 485 aaKnown RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 PCSK9Q8NBP7 692 aaKnown RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF483Q8TF39 744 aaPredicted RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 APOL5Q9BWW9 433 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 C22orf23Q9BZE7 217 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 REXO4Q9GZR2 422 aaKnown RBP3.43□□□□□ -1.86
LRIF1-203ENST00000494675 RSAD1Q9HA92 442 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 ZDHHC8Q9ULC8 765 aa3.43□□□□□ -1.86
LRIF1-203ENST00000494675 PMM2O15305 246 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 AGFG2O95081 481 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 MATN4O95460 622 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 C1SP09871 688 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 HDCP19113 662 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 MAKP20794 623 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 MAN2A2P49641 1150 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 NEK3P51956 506 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 RABGGTBP53611 331 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 SOX8P57073 446 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 TUBA3CQ13748 450 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 UBE4AQ14139 1066 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 BRD3Q15059 726 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 CSRP2Q16527 193 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 TUBA3EQ6PEY2 450 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 Q6ZRM9 215 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 C11orf96Q7Z7L8 435 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 PDSS2Q86YH6 399 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 IL31RAQ8NI17 732 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 NUP62CLQ9H1M0 184 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ATP6V0A4Q9HBG4 840 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 RLIMQ9NVW2 624 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 EIF2B4Q9UI10 523 aaKnown RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 SLC45A2Q9UMX9 530 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms