RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 B5MCH6 92 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 RFXAPO00287 272 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 FFAR3O14843 346 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 THAP12O43422 761 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 PLA2G6O60733 806 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 EIF5BO60841 1220 aaKnown RBP7.37□□□□□ -1.23
SMC2-205ENST00000493955 WDHD1O75717 1129 aaPredicted RBP7.37□□□□□ -1.23
SMC2-205ENST00000493955 HAUS5O94927 633 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 ALAS1P13196 640 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 SLC6A4P31645 630 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 LMBRD2Q68DH5 695 aaPredicted RBP7.37□□□□□ -1.23
SMC2-205ENST00000493955 ADGRG2Q8IZP9 1017 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 AOPEPQ8N6M6 819 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 CFHR4Q92496 578 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 TRIM63Q969Q1 353 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 KRTAP4-2Q9BYR5 136 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 STK33Q9BYT3 514 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 GTF2A1LQ9UNN4 478 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 KCTD3Q9Y597 815 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 PCDHGB3Q9Y5G1 929 aa7.37□□□□□ -1.23
SMC2-205ENST00000493955 A0A1B0GTL3 188 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 SKAP2O75563 359 aaPredicted RBP7.36□□□□□ -1.23
SMC2-205ENST00000493955 MT-ND5P03915 603 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 CSTBP04080 98 aaKnown RBP7.36□□□□□ -1.23
SMC2-205ENST00000493955 ALDH9A1P49189 494 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 CTBP1Q13363 440 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 RIN1Q13671 783 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 TMED8Q6PL24 325 aaPredicted RBP7.36□□□□□ -1.23
SMC2-205ENST00000493955 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 KBTBD2Q8IY47 623 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 EPC1Q9H2F5 836 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 GJB4Q9NTQ9 266 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 SLC4A7Q9Y6M7 1214 aa7.36□□□□□ -1.23
SMC2-205ENST00000493955 UBE2QL1A1L167 161 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 UNC5CO95185 931 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 AMHP03971 560 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ANXA1P04083 346 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 KLRC1P26715 233 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 PDIA3P30101 505 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 CLRN1P58418 232 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 PSMC1P62191 440 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 POU6F2P78424 691 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 GRM1Q13255 1194 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ALFQ53S48 1182 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ZNF761Q86XN6 746 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 PAF1Q8N7H5 531 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 DDX17Q92841 729 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 LTV1Q96GA3 475 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 TCF25Q9BQ70 676 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 EIF2AQ9BY44 585 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 PRDM16Q9HAZ2 1276 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 GPR35Q9HC97 309 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 A1CFQ9NQ94 594 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 PLEKHM1Q9Y4G2 1056 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 A0A087WWL8 130 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 GOLGA6L3A6NEY3 463 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 TCAF2A6NFQ2 919 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 MROH6A6NGR9 719 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 CLCA1A8K7I4 914 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 PYCARD-AS1I3L0S3 204 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 DNAJB5O75953 348 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 CARSP49589 748 aaKnown RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 RAP2BP61225 183 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 MXRA7P84157 204 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 DUSP8Q13202 625 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ZNF385BQ569K4 471 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 ATG14Q6ZNE5 492 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 CATSPERGQ6ZRH7 1159 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 UNC13DQ70J99 1090 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 RNF44Q7L0R7 432 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 SDR16C5Q8N3Y7 309 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 SHCBP1Q8NEM2 672 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 DACT3Q96B18 629 aaPredicted RBP7.35□□□□□ -1.23
SMC2-205ENST00000493955 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
SMC2-205ENST00000493955 MATN2O00339 956 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 HNRNPDLO14979 420 aaKnown RBP7.34□□□□□ -1.23
SMC2-205ENST00000493955 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
SMC2-205ENST00000493955 STC2O76061 302 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 POMCP01189 267 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 GRPP07492 148 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 IL1R1P14778 569 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 SLC11A2P49281 568 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 ZNF135P52742 658 aaPredicted RBP7.34□□□□□ -1.23
SMC2-205ENST00000493955 FAM214AQ32MH5 1076 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 GGT6Q6P531 493 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 FAM124AQ86V42 546 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 MPP5Q8N3R9 675 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 DNAJC5GQ8N7S2 189 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 IPCEF1Q8WWN9 437 aaPredicted RBP7.34□□□□□ -1.23
SMC2-205ENST00000493955 SCAMP4Q969E2 229 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 MUL1Q969V5 352 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 TINAGL1Q9GZM7 467 aaPredicted RBP7.34□□□□□ -1.23
SMC2-205ENST00000493955 MSL2Q9HCI7 577 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 ITGB1BP2Q9UKP3 347 aa7.34□□□□□ -1.23
SMC2-205ENST00000493955 SLC39A10Q9ULF5 831 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms