RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	KIAA0319	Q5VV43	1072 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	DSTYK	Q6XUX3	929 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SPATA31D4	Q6ZUB0	917 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	BRSK2	Q8IWQ3	736 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RNF168	Q8IYW5	571 aa	Predicted RBP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	KIAA0895	Q8NCT3	520 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	C3orf58	Q8NDZ4	430 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	TSPAN18	Q96SJ8	248 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CHST7	Q9NS84	486 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	MAPK8IP1	Q9UQF2	711 aa		11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PDCD11	Q14690	1871 aa	Known RBP	11.27	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	WDR87	Q6ZQQ6	2873 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	MYO10	Q9HD67	2058 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	TGFB1I1	O43294	461 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	EXOC3	O60645	756 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PRPF40A	O75400	957 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RHOBTB3	O94955	611 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SMC2	O95347	1197 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	GLUD1	P00367	558 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	TMEM191B	P0C7N4	346 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	NPR3	P17342	541 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CYP3A5	P20815	502 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ARPP19	P56211	112 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CREM	Q03060	361 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ITIH3	Q06033	890 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SNW1	Q13573	536 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	MTMR3	Q13615	1198 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RARS2	Q5T160	578 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SPATA1	Q5VX52	437 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PDXDC1	Q6P996	788 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ELMSAN1	Q6PJG2	1045 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CBWD2	Q8IUF1	395 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	EFCAB13	Q8IY85	973 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	C12orf76	Q8N812	135 aa	Predicted RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	XXYLT1	Q8NBI6	393 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ENGASE	Q8NFI3	743 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	GOLGA5	Q8TBA6	731 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CACTIN	Q8WUQ7	758 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PIK3R5	Q8WYR1	880 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ERCC4	Q92889	916 aa	Predicted RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SMARCE1	Q969G3	411 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RMDN1	Q96DB5	314 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	IPO9	Q96P70	1041 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ADAM7	Q9H2U9	754 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	POMK	Q9H5K3	350 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	KIAA1586	Q9HCI6	787 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PDE11A	Q9HCR9	933 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	DZANK1	Q9NVP4	752 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RMND1	Q9NWS8	449 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	DPP3	Q9NY33	737 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	DERA	Q9Y315	318 aa		11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.26	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	DMXL1	Q9Y485	3027 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	PPEF2	O14830	753 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CALU	O43852	315 aa	Predicted RBP	11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	LILRB3	O75022	631 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CLSTN1	O94985	981 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	EFEMP2	O95967	443 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	TNNC2	P02585	160 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ASGR2	P07307	311 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ADRB2	P07550	413 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	KRT19	P08727	400 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	FGFR3	P22607	806 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	LRPAP1	P30533	357 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CLCN4	P51793	760 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	WNT7B	P56706	349 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SNRPF	P62306	86 aa	Known RBP	11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ZBTB6	Q15916	424 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	BMT2	Q1RMZ1	405 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	C9orf57	Q5W0N0	161 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CWF19L1	Q69YN2	538 aa	Known RBP	11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CES5A	Q6NT32	575 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CD300LG	Q6UXG3	332 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ANKS3	Q6ZW76	656 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	USP37	Q86T82	979 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	LNX1	Q8TBB1	728 aa	Predicted RBP	11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SLC22A17	Q8WUG5	538 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CCDC127	Q96BQ5	260 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ANKRD36BP1	Q96IX9	119 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	SUSD3	Q96L08	255 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	NECTIN4	Q96NY8	510 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	FNBP1	Q96RU3	617 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	RXFP1	Q9HBX9	757 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	MAN1C1	Q9NR34	630 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	TSHZ2	Q9NRE2	1034 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	FNIP2	Q9P278	1114 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CGN	Q9P2M7	1197 aa	Known RBP	11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	LIMD1	Q9UGP4	676 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	C2CD2	Q9Y426	696 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	NR2E1	Q9Y466	385 aa		11.25	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	CACNA1B	Q00975	2339 aa		11.24	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ANK1	P16157	1881 aa		11.24	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	NCOR2	Q9Y618	2525 aa		11.24	□□□□□ -0.61
TRAPPC12-222	ENST00000493792		H7C4K7	107 aa		11.24	□□□□□ -0.61
TRAPPC12-222	ENST00000493792	ITGB3	P05106	788 aa		11.24	□□□□□ -0.61

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