RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 GPRC5CQ9NQ84 441 aa10.8□□□□□ -0.68
PRPF3-206ENST00000493553 XPNPEP1Q9NQW7 623 aa10.8□□□□□ -0.68
PRPF3-206ENST00000493553 DNAJB12Q9NXW2 375 aaKnown RBP10.8□□□□□ -0.68
PRPF3-206ENST00000493553 OGFRQ9NZT2 677 aa10.8□□□□□ -0.68
PRPF3-206ENST00000493553 A0A087X0T9 212 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 CCL15-CCL14A0A0B4J2E2 113 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TNFRSF10BO14763 440 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 FANCGO15287 622 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 ADCY3O60266 1144 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GH1P01241 217 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TMEM253P0C7T8 217 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 FAM228BP0C875 321 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TRIM49P0CI25 452 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TRIM49CP0CI26 452 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TXNP10599 105 aaKnown RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GZMAP12544 262 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 ACTN1P12814 892 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 CDC42EP1Q00587 391 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GCNT1Q02742 428 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GPS2Q13227 327 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 TCEAL1Q15170 157 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 PPP2R5EQ16537 467 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 CCL15Q16663 113 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 WDR78Q5VTH9 848 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 CCDC62Q6P9F0 684 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 ZNF571Q7Z3V5 609 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 APBB1IPQ7Z5R6 666 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 RHOT2Q8IXI1 618 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 MSANTD4Q8NCY6 345 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 LMO3Q8TAP4 145 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 SPATA33Q96N06 139 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GPR20Q99678 358 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 MRPL4Q9BYD3 311 aaKnown RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 PCIF1Q9H4Z3 704 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 GBA2Q9HCG7 927 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 POLD4Q9HCU8 107 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 ERAP1Q9NZ08 941 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 AGO2Q9UKV8 859 aaKnown RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
PRPF3-206ENST00000493553 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
PRPF3-206ENST00000493553 COL1A2P08123 1366 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 MYH11P35749 1972 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 RBM47A0AV96 593 aaKnown RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 ANKRD62A6NC57 917 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 LRRIQ4A6NIV6 560 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 PDHXO00330 501 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 PROCP04070 461 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 ADSSP30520 456 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 GCLMP48507 274 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 MAPK6Q16659 721 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 CBWD3Q5JTY5 395 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 CBWD5Q5RIA9 395 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 ZNF677Q86XU0 584 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 KSR1Q8IVT5 923 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 FAM71AQ8IYT1 594 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 SLC30A5Q8TAD4 765 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 RFFLQ8WZ73 363 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 FAXDC2Q96IV6 333 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 PKNOX2Q96KN3 472 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 NAP1L3Q99457 506 aaPredicted RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 NFKBIZQ9BYH8 718 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 IMPG2Q9BZV3 1241 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 UBE2TQ9NPD8 197 aaPredicted RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 RAB20Q9NX57 234 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 RAB21Q9UL25 225 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 NENFQ9UMX5 172 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 COL11A1P12107 1806 aaPredicted RBP10.78□□□□□ -0.68
PRPF3-206ENST00000493553 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 PTPRFP10586 1907 aa10.78□□□□□ -0.68
PRPF3-206ENST00000493553 A0A0B4J269 797 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 IGKV6-21A0A0C4DH24 114 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 SLC15A5A6NIM6 579 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 CLDN3O15551 220 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 PPFIA4O75335 1185 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 TOM1L1O75674 476 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 MOCS3O95396 460 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 ATP1A1P05023 1023 aaKnown RBP10.77□□□□□ -0.69
PRPF3-206ENST00000493553 NID1P14543 1247 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 GLRA2P23416 452 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 TMOD1P28289 359 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 FAM193AP78312 1265 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 PPP3CAQ08209 521 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 NAA30Q147X3 362 aaPredicted RBP10.77□□□□□ -0.69
PRPF3-206ENST00000493553 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 FAM110CQ1W6H9 321 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 CDCA2Q69YH5 1023 aaPredicted RBP10.77□□□□□ -0.69
PRPF3-206ENST00000493553 FBXO38Q6PIJ6 1188 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 MAMDC4Q6UXC1 1216 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
PRPF3-206ENST00000493553 CBWD2Q8IUF1 395 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms