RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CYP2C19P33261 490 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 PHKA1P46020 1223 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 HGFACQ04756 655 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 PUM3Q15397 648 aaKnown RBP5.3□□□□□ -1.56
CLIP4-212ENST00000493551 TRIM60Q495X7 471 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 FKBP1CQ5VVH2 108 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 ANKRD44Q8N8A2 993 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 VGLL2Q8N8G2 317 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 OR14K1Q8NGZ2 314 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 WDR66Q8TBY9 1149 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 P2RX7Q99572 595 aaKnown RBP5.3□□□□□ -1.56
CLIP4-212ENST00000493551 KCNJ15Q99712 375 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 INO80BQ9C086 356 aaPredicted RBP5.3□□□□□ -1.56
CLIP4-212ENST00000493551 FLRT1Q9NZU1 646 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 PACSIN3Q9UKS6 424 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 DOCK3Q8IZD9 2030 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 A0A0C4DFX4 3053 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 ZAR1LA6NP61 321 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 GRXCR1A8MXD5 290 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 CD38P28907 300 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 PLA2G5P39877 138 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 SCNN1GP51170 649 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 MAP3K12Q12852 859 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 ATP2B3Q16720 1220 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 COLEC12Q5KU26 742 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 MAP3K21Q5TCX8 1036 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 FAM109BQ6ICB4 259 aaPredicted RBP5.29□□□□□ -1.56
CLIP4-212ENST00000493551 LBX2Q6XYB7 198 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 USP53Q70EK8 1073 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 GPR142Q7Z601 462 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 FAM178BQ8IXR5 827 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 RNPC3Q96LT9 517 aaKnown RBP5.29□□□□□ -1.56
CLIP4-212ENST00000493551 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
CLIP4-212ENST00000493551 TMOD4Q9NZQ9 345 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 SAP30BPQ9UHR5 308 aaKnown RBP5.29□□□□□ -1.56
CLIP4-212ENST00000493551 SH3BP1Q9Y3L3 701 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 PLXNB2O15031 1838 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 UNC80Q8N2C7 3258 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 CUL9Q8IWT3 2517 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 PTPRFP10586 1907 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 MYH13Q9UKX3 1938 aa5.29□□□□□ -1.56
CLIP4-212ENST00000493551 TRIM43BA6NCK2 446 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 ENTPD3O75355 529 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 CDK4P11802 303 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 FGFR2P21802 821 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 PTGS1P23219 599 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 RGS2P41220 211 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 ADCYAP1R1P41586 468 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 GCLCP48506 637 aaPredicted RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 HERVK_113P62684 666 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 TOB2Q14106 344 aaPredicted RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 STILQ15468 1287 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 PRAMEF19Q5SWL8 479 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 ADGRG3Q86Y34 549 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 TRPV1Q8NER1 839 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 GPRC5AQ8NFJ5 357 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 SOCS4Q8WXH5 440 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 TRIM43Q96BQ3 446 aaPredicted RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 MIEF2Q96C03 454 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 ANAPC16Q96DE5 110 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 SEC16BQ96JE7 1060 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 BBC3Q96PG8 261 aaPredicted RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 CHMP4AQ9BY43 222 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 CD244Q9BZW8 370 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 PRDM12Q9H4Q4 367 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 INCENPQ9NQS7 918 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 DDX20Q9UHI6 824 aaKnown RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 CDC42EP3Q9UKI2 254 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 PA2G4Q9UQ80 394 aaKnown RBP5.28□□□□□ -1.56
CLIP4-212ENST00000493551 SLC45A1Q9Y2W3 748 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 MAST2Q6P0Q8 1798 aa5.28□□□□□ -1.56
CLIP4-212ENST00000493551 LTBP2Q14767 1821 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 COL2A1P02458 1487 aaPredicted RBP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 EYA2O00167 538 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 PQBP1O60828 265 aaKnown RBP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 ALDH1L1O75891 902 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 ITGB8P26012 769 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 MAN2A2P49641 1150 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 MECOMQ03112 1051 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 RIN1Q13671 783 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 RASGRF1Q13972 1273 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 MFSD14CQ5VZR4 134 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 BTBD8Q5XKL5 378 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 Q6ZRM9 215 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 CCDC129Q6ZRS4 1044 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 MAPKAPK5Q8IW41 473 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 SLC25A43Q8WUT9 341 aaPredicted RBP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 LPIN2Q92539 896 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 LENG9Q96B70 501 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 UHRF1Q96T88 793 aaPredicted RBP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 FEZ1Q99689 392 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 ZFYVE21Q9BQ24 234 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 GNL3LQ9NVN8 582 aaKnown RBP5.27□□□□□ -1.57
CLIP4-212ENST00000493551 GALNT8Q9NY28 637 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 RFX7Q2KHR2 1363 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 LOC285556D6RIA3 1793 aa5.27□□□□□ -1.57
CLIP4-212ENST00000493551 MROH7-TTC4A0A0A0MT08 1334 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms