RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NELFBQ8WX92 580 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 CASP10Q92851 521 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 CCDC127Q96BQ5 260 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 SF3B1O75533 1304 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTSA-209ENST00000493522 ZFHX2Q9C0A1 2572 aaPredicted RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 HIDE1A8MVS5 230 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 GFRA3O60609 400 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 B3GAT3O94766 335 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 URODP06132 367 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 TNNI1P19237 187 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 AVPR2P30518 371 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 NUBP1P53384 320 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 LRRC63Q05C16 580 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 PAK1Q13153 545 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 MTMR3Q13615 1198 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 MYBPC2Q14324 1141 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 PSMD6Q15008 389 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 ZBTB6Q15916 424 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 NFIL3Q16649 462 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 CENPPQ6IPU0 288 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 DCLRE1AQ6PJP8 1040 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 ATOH1Q92858 354 aaPredicted RBP12.52□□□□□ -0.41
CTSA-209ENST00000493522 ANKRD36BP1Q96IX9 119 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 CGRRF1Q99675 332 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 MTMR12Q9C0I1 747 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 ZBP1Q9H171 429 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 DMAC2Q9NW81 257 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 STK39Q9UEW8 545 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 PTPRJQ12913 1337 aa12.52□□□□□ -0.41
CTSA-209ENST00000493522 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.51□□□□□ -0.41
CTSA-209ENST00000493522 BICDL2A1A5D9 508 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 I3L4J1 428 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 PPEF2O14830 753 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 CETN3O15182 167 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 TNNC2P02585 160 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 SOD2P04179 222 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 LRPAP1P30533 357 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 BRCC3P46736 316 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 GLUD2P49448 558 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
CTSA-209ENST00000493522 STX17P56962 302 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 ITIH3Q06033 890 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 ELAVL2Q12926 359 aaKnown RBP12.51□□□□□ -0.41
CTSA-209ENST00000493522 ADAM9Q13443 819 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 FAM171A1Q5VUB5 890 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 ANKRD40Q6AI12 368 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 KIAA1841Q6NSI8 718 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
CTSA-209ENST00000493522 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 UBALD2Q8IYN6 164 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 KREMEN2Q8NCW0 462 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 AUTS2Q8WXX7 1259 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
CTSA-209ENST00000493522 B3GALT6Q96L58 329 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 GPR62Q9BZJ7 368 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 FAM86C1Q9NVL1 165 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 HCFC2Q9Y5Z7 792 aa12.51□□□□□ -0.41
CTSA-209ENST00000493522 C2CD2LO14523 706 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 TRAPPC3O43617 180 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 AKAP3O75969 853 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 CLSTN1O94985 981 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 ITGB3P05106 788 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 KRT19P08727 400 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 CTSAP10619 480 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 KRT13P13646 458 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 IGFBP6P24592 240 aaPredicted RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 PSMC2P35998 433 aaKnown RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 NLRP12P59046 1061 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 USP41Q3LFD5 358 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 DPCR1Q3MIW9 517 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 CEP57Q86XR8 500 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms