RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 VCLP18206 1134 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 GTF2H1P32780 548 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 SLC1A1P43005 524 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 FMO5P49326 533 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 SCNN1BP51168 640 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ARFIP2P53365 341 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 GEMIN4P57678 1058 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 KRT17Q04695 432 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 MED21Q13503 144 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 DCTN2Q13561 401 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 THOC5Q13769 683 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 SLC1A5Q15758 541 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 CERKLQ49MI3 558 aaPredicted RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 EAPPQ56P03 285 aaPredicted RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 EFHC2Q5JST6 749 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 RBM26Q5T8P6 1007 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 CCDC62Q6P9F0 684 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ZNF449Q6P9G9 518 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 UGT2A3Q6UWM9 527 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 IZUMO2Q6UXV1 221 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 Q6ZNX1 250 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 RNF207Q6ZRF8 634 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 RINLQ6ZS11 566 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ZNF804AQ7Z570 1209 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 GPBP1Q86WP2 473 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 LRRC6Q86X45 466 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 GPIHBP1Q8IV16 184 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ZBED8Q8IZ13 594 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 TRPC4APQ8TEL6 797 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 DDI1Q8WTU0 396 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 FAM172AQ8WUF8 416 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 JADE3Q92613 823 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 DDX17Q92841 729 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 SLC35B4Q969S0 331 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 MCUR1Q96AQ8 359 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 HAUS1Q96CS2 278 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 FAM81BQ96LP2 452 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 FGFBP2Q9BYJ0 223 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 RBM38Q9H0Z9 239 aaKnown RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 S100A14Q9HCY8 104 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 AVENQ9NQS1 362 aaPredicted RBP7.13□□□□□ -1.27
EWSR1-220ENST00000493426 FAIMQ9NVQ4 179 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 NDE1Q9NXR1 346 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 KCNK4Q9NYG8 393 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 TMOD3Q9NYL9 352 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 THEGQ9P2T0 379 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 HEY2Q9UBP5 337 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 APEX2Q9UBZ4 518 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 PCDHA12Q9UN75 941 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 TELO2Q9Y4R8 837 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 MYH3P11055 1940 aa7.13□□□□□ -1.27
EWSR1-220ENST00000493426 ASTN1O14525 1302 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 TCRBV7S2A1N4TA0A589 114 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 KANSL1LA0AUZ9 987 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CCDC162PA2VCL2 907 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 POTEMA6NI47 508 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 EIF4E1BA6NMX2 242 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 E9PBE3 544 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 F5H6K3 240 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 TGFB1I1O43294 461 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CCNT2O60583 730 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CIB2O75838 187 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 TDP2O95551 362 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CD48P09326 243 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 UBTFL6P0CB48 400 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SMIM18P0DKX4 95 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SNHG28P0DPA3 235 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CYP19A1P11511 503 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CDK4P11802 303 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 KLRC2P26717 231 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 RPA3P35244 121 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 KCNJ1P48048 391 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 MARCKSL1P49006 195 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 ADCY7P51828 1080 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 NEK3P51956 506 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CHN2P52757 468 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 ADARP55265 1226 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 BTKQ06187 659 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CHRNDQ07001 517 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 TBL3Q12788 808 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 RASA3Q14644 834 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SF3B3Q15393 1217 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 ANKRD20A4Q4UJ75 823 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SGO2Q562F6 1265 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CAVIN4Q5BKX8 364 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 MEX3CQ5U5Q3 659 aaKnown RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 AADACL2Q6P093 401 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 CCDC25Q86WR0 208 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SFR1Q86XK3 245 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 SCUBE1Q8IWY4 988 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 DNAJC10Q8IXB1 793 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 ZNF444Q8N0Y2 327 aaPredicted RBP7.12□□□□□ -1.27
EWSR1-220ENST00000493426 AHI1Q8N157 1196 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 BBS5Q8N3I7 341 aa7.12□□□□□ -1.27
EWSR1-220ENST00000493426 BANPQ8N9N5 519 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms