RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 MAP1BP46821 2468 aaKnown RBP23.43■■□□□ 1.34
PFDN4-205ENST00000493356 RETP07949 1114 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 TRAPPC10P48553 1259 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 MLLT6P55198 1093 aaPredicted RBP23.43■■□□□ 1.34
PFDN4-205ENST00000493356 PRR23BQ6ZRT6 265 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 BEST2Q8NFU1 509 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 RSPRY1Q96DX4 576 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 SLITRK6Q9H5Y7 841 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 DNM3Q9UQ16 869 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 STK24Q9Y6E0 443 aa23.43■■□□□ 1.34
PFDN4-205ENST00000493356 SLC16A4O15374 487 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 LRP3O75074 770 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 MARCKSP29966 332 aaPredicted RBP23.42■■□□□ 1.34
PFDN4-205ENST00000493356 SEZ6Q53EL9 994 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 RINT1Q6NUQ1 792 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 E2F7Q96AV8 911 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 LRRC3Q9BY71 257 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 GPR88Q9GZN0 384 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 C17orf75Q9HAS0 396 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 ANKFY1Q9P2R3 1169 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 RALGAPA1Q6GYQ0 2036 aa23.42■■□□□ 1.34
PFDN4-205ENST00000493356 PP2D1A8MPX8 630 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 TOM1L1O75674 476 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 VNN2O95498 520 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 YWHAHQ04917 246 aaPredicted RBP23.41■■□□□ 1.34
PFDN4-205ENST00000493356 PTGDRQ13258 359 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 NOLC1Q14978 699 aaKnown RBP eCLIP23.41■■□□□ 1.34
PFDN4-205ENST00000493356 C1orf186Q6ZWK4 172 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 TMC8Q8IU68 726 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 TMEM130Q8N3G9 435 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 SPEM1Q8N4L4 309 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 NETO1Q8TDF5 533 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 CSGALNACT1Q8TDX6 532 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 MSANTD3Q96H12 275 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 NTPCRQ9BSD7 190 aaKnown RBP23.41■■□□□ 1.34
PFDN4-205ENST00000493356 RAB34Q9BZG1 259 aa23.41■■□□□ 1.34
PFDN4-205ENST00000493356 NOL7Q9UMY1 257 aaKnown RBP23.41■■□□□ 1.34
PFDN4-205ENST00000493356 MYH11P35749 1972 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 A0A1W2PRU2 124 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 SLC38A8A6NNN8 435 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 SFI1A8K8P3 1242 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 CHURC1-FNTBB4DL54 471 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 M0QZQ0 153 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 SLC30A4O14863 429 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 HRO43593 1189 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 OAZ2O95190 189 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 ADRB1P08588 477 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 FNTBP49356 437 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 DMWDQ09019 674 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 GNL2Q13823 731 aaKnown RBP23.4■■□□□ 1.34
PFDN4-205ENST00000493356 SIM2Q14190 667 aaPredicted RBP23.4■■□□□ 1.34
PFDN4-205ENST00000493356 C1orf228Q6PIY5 440 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 KCNK18Q7Z418 384 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 CCDC83Q8IWF9 413 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 YAF2Q8IY57 180 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 PGLYRP2Q96PD5 576 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 DNAJC25Q9H1X3 360 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 CRISPLD1Q9H336 500 aa23.4■■□□□ 1.34
PFDN4-205ENST00000493356 RBM12Q9NTZ6 932 aaKnown RBP23.4■■□□□ 1.34
PFDN4-205ENST00000493356 TIMM13Q9Y5L4 95 aaPredicted RBP23.4■■□□□ 1.34
PFDN4-205ENST00000493356 CHADO15335 359 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 OR4Q2P0C623 313 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 SOX9P48436 509 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 FCHO2Q0JRZ9 810 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 STRN3Q13033 797 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 LRRC32Q14392 662 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 WDR44Q5JSH3 913 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 KRT79Q5XKE5 535 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 LLPHQ9BRT6 129 aaKnown RBP23.39■■□□□ 1.33
PFDN4-205ENST00000493356 C8orf33Q9H7E9 229 aaPredicted RBP23.39■■□□□ 1.33
PFDN4-205ENST00000493356 SEMA4GQ9NTN9 838 aa23.39■■□□□ 1.33
PFDN4-205ENST00000493356 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 K7ESF4 209 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 PAPSS2O95340 614 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 CXCL8P10145 99 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 CDC25AP30304 524 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 LRPAP1P30533 357 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 TOB1P50616 345 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 KPNA1P52294 538 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 SPAG1Q07617 926 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 DUSP4Q13115 394 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 SRSF5Q13243 272 aaKnown RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 PLD1Q13393 1074 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 STXBP5Q5T5C0 1151 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 ZPBP2Q6X784 338 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 Q6ZS52 159 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 TMEM161BQ8NDZ6 487 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 SPIRE2Q8WWL2 714 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 TIPINQ9BVW5 301 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 OXCT2Q9BYC2 517 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 LIMCH1Q9UPQ0 1083 aa23.38■■□□□ 1.33
PFDN4-205ENST00000493356 NUP210Q8TEM1 1887 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-205ENST00000493356 GUCY2CP25092 1073 aa23.37■■□□□ 1.33
PFDN4-205ENST00000493356 CNR2P34972 360 aa23.37■■□□□ 1.33
PFDN4-205ENST00000493356 AARSP49588 968 aaKnown RBP eCLIP23.37■■□□□ 1.33
PFDN4-205ENST00000493356 EPHB3P54753 998 aa23.37■■□□□ 1.33
PFDN4-205ENST00000493356 MCL1Q07820 350 aa23.37■■□□□ 1.33
PFDN4-205ENST00000493356 GPR17Q13304 367 aa23.37■■□□□ 1.33
PFDN4-205ENST00000493356 CSRP2Q16527 193 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms