RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CASP10Q92851 521 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 COLEC11Q9BWP8 271 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 APOL5Q9BWW9 433 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 ZBP1Q9H171 429 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 ASB7Q9H672 318 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 GRPEL1Q9HAV7 217 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 CITO14578 2027 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 TTC26A0AVF1 554 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 C2orf71A6NGG8 1288 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 CBFA2T2O43439 604 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 GLP2RO95838 553 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 TNNC2P02585 160 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 URODP06132 367 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 CTSAP10619 480 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 GCLMP48507 274 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 UBASH3AP57075 661 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 BIRC3Q13489 604 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 TMEM132DQ14C87 1099 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 GLRA4Q5JXX5 417 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 FKBP15Q5T1M5 1219 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 JADE1Q6IE81 842 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 KIAA1841Q6NSI8 718 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 WDR49Q8IV35 697 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 MRPL43Q8N983 215 aaKnown RBP14.48□□□□□ -0.09
MSH6-208ENST00000493177 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
MSH6-208ENST00000493177 SLC35C1Q96A29 364 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 ANKRD36BP1Q96IX9 119 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 EMILIN2Q9BXX0 1053 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 TRIM5Q9C035 493 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 NDST4Q9H3R1 872 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 IFNKQ9P0W0 207 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 PRKAG3Q9UGI9 489 aa14.48□□□□□ -0.09
MSH6-208ENST00000493177 C2CD2LO14523 706 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 MEFVO15553 781 aaPredicted RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 N4BP1O75113 896 aaKnown RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 PHACTR2O75167 634 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 CLSTN1O94985 981 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 TPM3P06753 285 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 NFICP08651 508 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 RBM10P98175 930 aaKnown RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 ENPEPQ07075 957 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 SMAD2Q15796 467 aaKnown RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 DUOXA2Q1HG44 320 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 ADHFE1Q8IWW8 467 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 EFCAB13Q8IY85 973 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 COLGALT2Q8IYK4 626 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 BCL7CQ8WUZ0 217 aaPredicted RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 MSLNLQ96KJ4 702 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 FAM84AQ96KN4 292 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 MTMR12Q9C0I1 747 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 MRPL17Q9NRX2 175 aaKnown RBP14.47□□□□□ -0.09
MSH6-208ENST00000493177 INTS13Q9NVM9 706 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 CLEC1BQ9P126 229 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 SSX2IPQ9Y2D8 614 aa14.47□□□□□ -0.09
MSH6-208ENST00000493177 PTPRJQ12913 1337 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 SMIM28A0A1B0GU29 152 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 XPOTO43592 962 aaKnown RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 B4GALT3O60512 393 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 CLASP2O75122 1294 aaKnown RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 TADA2AO75478 443 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 SOD2P04179 222 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 THP07101 528 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 KLRC2P26717 231 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 GTF2H1P32780 548 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 FMO5P49326 533 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 MRE11P49959 708 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 MXI1P50539 228 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 AP3M2P53677 418 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 MYL7Q01449 175 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 UBXN1Q04323 297 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 PPP3CAQ08209 521 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 CETN1Q12798 172 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 MIIPQ5JXC2 388 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 C1orf220Q5T0J3 134 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 CES5AQ6NT32 575 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 ANKRD54Q6NXT1 300 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 ALKAL1Q6UXT8 129 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 APTXQ7Z2E3 356 aaKnown RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 NT5DC4Q86YG4 428 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 SMRP1Q8NCR6 262 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 BEST2Q8NFU1 509 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 OR5B17Q8NGF7 314 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 PCMTD1Q96MG8 357 aaPredicted RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 NAP1L5Q96NT1 182 aaPredicted RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 XPO4Q9C0E2 1151 aaKnown RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 TMEM8AQ9HCN3 771 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 DERAQ9Y315 318 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 R3HCC1Q9Y3T6 440 aaKnown RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 C2CD2Q9Y426 696 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.09
MSH6-208ENST00000493177 HCFC2Q9Y5Z7 792 aa14.46□□□□□ -0.09
MSH6-208ENST00000493177 REV3LO60673 3130 aa14.46□□□□□ -0.1
MSH6-208ENST00000493177 A0A1B0GTH6 734 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 CASTOR2A6NHX0 329 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 LRRC10BA6NIK2 292 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms