RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 TAF6P49848 677 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 KCNQ1P51787 676 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 SV2CQ496J9 727 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 ZCWPW2Q504Y3 356 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 ANKRD54Q6NXT1 300 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 OR5B17Q8NGF7 314 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 SLC22A17Q8WUG5 538 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 CGRRF1Q99675 332 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 TSG101Q99816 390 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 DZANK1Q9NVP4 752 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 MTRRQ9UBK8 725 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 AGAP1Q9UPQ3 857 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 ARHGEF37A1IGU5 675 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 H7C4K7 107 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 ODC1P11926 461 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 RBP5P82980 135 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 ADAM9Q13443 819 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 MORC3Q14149 939 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
CLIP2-209ENST00000493166 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 CENPPQ6IPU0 288 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-209ENST00000493166 ELMSAN1Q6PJG2 1045 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 USP37Q86T82 979 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 PALB2Q86YC2 1186 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-209ENST00000493166 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
CLIP2-209ENST00000493166 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 NUP62CLQ9H1M0 184 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 DPP7Q9UHL4 492 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 CDY1Q9Y6F8 540 aa13.79□□□□□ -0.2
CLIP2-209ENST00000493166 KPNA7A9QM74 516 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 CETN3O15182 167 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 SPTLC1O15269 473 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 ADAM12O43184 909 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-209ENST00000493166 BMP6P22004 513 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 OR1D2P34982 312 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-209ENST00000493166 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 BFSP1Q12934 665 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
CLIP2-209ENST00000493166 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 KLHL10Q6JEL2 608 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 FAM186BQ8IYM0 893 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 LRRC52Q8N7C0 313 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 TRIML1Q8N9V2 468 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 SMRP1Q8NCR6 262 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 DHTKD1Q96HY7 919 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-209ENST00000493166 APOL5Q9BWW9 433 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 SIX4Q9UIU6 781 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 FAM50BQ9Y247 325 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-209ENST00000493166 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
CLIP2-209ENST00000493166 TRIM49BA6NDI0 452 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 LRRIQ3A6PVS8 624 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 CYB561D2O14569 222 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 MAPK13O15264 365 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 MBTPS2O43462 519 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 TGM5O43548 720 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 PHACTR2O75167 634 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 AKAP3O75969 853 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 C1RP00736 705 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 KRT13P13646 458 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 TYMPP19971 482 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 CCNE1P24864 410 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 AP3M2P53677 418 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 SYCE2Q6PIF2 218 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 INTS8Q75QN2 995 aaKnown RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 TRAPPC11Q7Z392 1133 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 METTL23Q86XA0 190 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 PLEKHO2Q8TD55 490 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-209ENST00000493166 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms