RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PTK2Q05397 1052 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 SYT10Q6XYQ8 523 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 ECHDC2Q86YB7 292 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 DBF4BQ8NFT6 615 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 SEPT8Q92599 483 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 APBB2Q92870 758 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 HPDLQ96IR7 371 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 GAD1Q99259 594 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 WNT8AQ9H1J5 351 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 VRTNQ9H8Y1 702 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 RNF19AQ9NV58 838 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 TMEM39AQ9NV64 488 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 SLC38A7Q9NVC3 462 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 ZMYND8Q9ULU4 1186 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 PPP2R2CQ9Y2T4 447 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 ADGRG1Q9Y653 693 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 ARL5CA6NH57 179 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 C9IYK1 514 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 PTGESO14684 152 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 ZSCAN12O43309 604 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 CCL23P55773 120 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 ASTE1Q2TB18 679 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 RTN4RL1Q86UN2 441 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 TMEM130Q8N3G9 435 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 SCLYQ96I15 445 aa15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 PPP1R10Q96QC0 940 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-210ENST00000492909 TRIM43BA6NCK2 446 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 EOMESO95936 686 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 THP07101 528 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 KRT5P13647 590 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 P4HA1P13674 534 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ANXA13P27216 316 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 CYP2C18P33260 490 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ETF1P62495 437 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 KRT83P78385 493 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 SPA17Q15506 151 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ZNF598Q86UK7 904 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 REXO1L1PQ8IX06 675 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 LRRC52Q8N7C0 313 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ACRBPQ8NEB7 543 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 GSTCDQ8NEC7 633 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 LINC01599Q8WXQ3 324 aa15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 TRIM43Q96BQ3 446 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 NXF1Q9UBU9 619 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-210ENST00000492909 ANO9A1A5B4 782 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 CYP26A1O43174 497 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 CXCL10P02778 98 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 ASPAP45381 313 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 YWHAEP62258 255 aaKnown RBP15.08■□□□□ 0
PDZRN3-210ENST00000492909 FAM189BP81408 668 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 CBX1P83916 185 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 C9orf57Q5W0N0 161 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 SMYD5Q6GMV2 418 aa15.08■□□□□ 0
PDZRN3-210ENST00000492909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.08■□□□□ 0
PDZRN3-210ENST00000492909 LCA5LO95447 670 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 ACO1P21399 889 aaKnown RBP15.07■□□□□ 0
PDZRN3-210ENST00000492909 ITGB8P26012 769 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 SCNN1GP51170 649 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 SOX4Q06945 474 aaPredicted RBP15.07■□□□□ 0
PDZRN3-210ENST00000492909 SLC18A3Q16572 532 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 TMEM270Q6UE05 265 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 SCARA5Q6ZMJ2 495 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 ZNF560Q96MR9 790 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 BCO2Q9BYV7 579 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 ADAMTS1Q9UHI8 967 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 POLIQ9UNA4 740 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 CNTN6Q9UQ52 1028 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 PCDHB4Q9Y5E5 795 aa15.07■□□□□ 0
PDZRN3-210ENST00000492909 PIRO00625 290 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 PPEF2O14830 753 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 LRPAP1P30533 357 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 PNPLA4P41247 253 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 PDE6CP51160 858 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
PDZRN3-210ENST00000492909 BPIFB4P59827 614 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 TNNC1P63316 161 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 GFPT1Q06210 699 aaPredicted RBP15.06■□□□□ 0
PDZRN3-210ENST00000492909 BMS1Q14692 1282 aaKnown RBP15.06■□□□□ 0
PDZRN3-210ENST00000492909 SLC47A2Q86VL8 602 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 UBR7Q8N806 425 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 EPS8L1Q8TE68 723 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 GOLGA2P5Q9HBQ8 144 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 CISHQ9NSE2 258 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 MIOSQ9NXC5 875 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 OGFRQ9NZT2 677 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 REXO2Q9Y3B8 237 aaKnown RBP15.06■□□□□ 0
PDZRN3-210ENST00000492909 TTC3P53804 2025 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms