RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 SV2BQ7L1I2 683 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF720Q7Z2F6 126 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 NT5DC4Q86YG4 428 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 C1orf210Q8IVY1 113 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 PJA1Q8NG27 643 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 E2F7Q96AV8 911 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
COL6A1-205ENST00000492851 ASAH2Q9NR71 780 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 ASB3Q9Y575 518 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 STYXL1Q9Y6J8 313 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 MORC2Q9Y6X9 1032 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-205ENST00000492851 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 FAM189A1O60320 539 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 SEC24AO95486 1093 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 FGF19O95750 216 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 SYT1P21579 422 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 EPHB3P54753 998 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 EPHA5P54756 1037 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 GRIN1Q05586 938 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 SPAG1Q07617 926 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 TWF1Q12792 350 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 SMARCB1Q12824 385 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 TMEM132DQ14C87 1099 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 PTPAQ15257 358 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 IRF7Q92985 503 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
COL6A1-205ENST00000492851 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 CLIC4Q9Y696 253 aa13.51□□□□□ -0.25
COL6A1-205ENST00000492851 PIRO00625 290 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 MAN2B1O00754 1011 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 IL18RAPO95256 599 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 DCNP07585 359 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 TUFMP49411 452 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 ALCAMQ13740 583 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 SLC5A9Q2M3M2 681 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 C9orf57Q5W0N0 161 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 JADE1Q6IE81 842 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 RNF19BQ6ZMZ0 732 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 THEM5Q8N1Q8 247 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 FIZ1Q96SL8 496 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 TRMT61BQ9BVS5 477 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 MRPL44Q9H9J2 332 aaKnown RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
COL6A1-205ENST00000492851 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-205ENST00000492851 FAM170BA6NMN3 283 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 GLULP15104 373 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 CEBPBP17676 345 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 PSMC3P17980 439 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ACOT2P49753 483 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 MLLT6P55198 1093 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-205ENST00000492851 DUSP4Q13115 394 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 SLC39A14Q15043 492 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF528Q3MIS6 628 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-205ENST00000492851 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 C1orf228Q6PIY5 440 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-205ENST00000492851 LRRC15Q8TF66 581 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 C2orf15Q8WU43 125 aaKnown RBP13.49□□□□□ -0.25
COL6A1-205ENST00000492851 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 SENP8Q96LD8 212 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ASB16Q96NS5 453 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ACCSQ96QU6 501 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 BRD9Q9H8M2 597 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 TRPV4Q9HBA0 871 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 CEP72Q9P209 647 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 FBXO4Q9UKT5 387 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 TIMM13Q9Y5L4 95 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-205ENST00000492851 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
COL6A1-205ENST00000492851 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 ANKRD63C9JTQ0 380 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 LAMTOR5O43504 91 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 LMNAP02545 664 aaKnown RBP13.48□□□□□ -0.25
COL6A1-205ENST00000492851 CYP11A1P05108 521 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms