RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GOLGA8SH3BPF8 625 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 INO80B-WBP1J3KQ70 363 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 PIK3R2O00459 728 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 RGS16O15492 202 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-220ENST00000492280 ADCY3O60266 1144 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 ATG7O95352 703 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 KRT19P08727 400 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 TCEAL1Q15170 157 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 KYNUQ16719 465 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 EFCAB13Q8IY85 973 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 ABRAQ8N0Z2 381 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 TFAP2BQ92481 460 aa13.24□□□□□ -0.29
HMGN1-220ENST00000492280 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-220ENST00000492280 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-220ENST00000492280 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
HMGN1-220ENST00000492280 VGLL3A8MV65 326 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 FSCN2O14926 492 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 MSCO60682 206 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 CDH8P55286 799 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 CYP1B1Q16678 543 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 ASCC2Q9H1I8 757 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 FAM189A1O60320 539 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 PIAS1O75925 651 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 PROSCO94903 275 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 PRKCBP05771 671 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 DYNLT1P63172 113 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 CLDN10P78369 228 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 TARBP2Q15633 366 aaKnown RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 TADA2BQ86TJ2 420 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 ART4Q93070 314 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 TLCD1Q96CP7 247 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 MRRFQ96E11 262 aaKnown RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 FGD4Q96M96 766 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-220ENST00000492280 CSADQ9Y600 493 aa13.23□□□□□ -0.29
HMGN1-220ENST00000492280 ZBTB42B2RXF5 422 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 PODXLO00592 558 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 FAM107AO95990 144 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 CXCL8P10145 99 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 HSPA6P17066 643 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 ADCY8P40145 1251 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 GPAT2Q6NUI2 795 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 DNERQ8NFT8 737 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 JPH2Q9BR39 696 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-220ENST00000492280 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 DDX20Q9UHI6 824 aaKnown RBP13.22□□□□□ -0.29
HMGN1-220ENST00000492280 SIP14410 1827 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 IGKV6D-21A0A0A0MT36 114 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 ZC3H11AO75152 810 aaKnown RBP eCLIP13.22□□□□□ -0.29
HMGN1-220ENST00000492280 BANF1O75531 89 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 NUDT17P0C025 328 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 CD19P15391 556 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 ICAM3P32942 547 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 MAGEA9P43362 315 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 FNTAP49354 379 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 CYP4F22Q6NT55 531 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 ARFGAP2Q8N6H7 521 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 OSBPL8Q9BZF1 889 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 CISHQ9NSE2 258 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 TMEM51Q9NW97 253 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 GGT7Q9UJ14 662 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
HMGN1-220ENST00000492280 GMNCA6NCL1 334 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 CNMDO75829 334 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 CETPP11597 493 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 IVDP26440 423 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 PPP2R5EQ16537 467 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 MFSD7Q6UXD7 560 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 GSTA5Q7RTV2 222 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 HOOK3Q86VS8 718 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 BRSK2Q8IWQ3 736 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 EMC1Q8N766 993 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 SPATA33Q96N06 139 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 PRMT1Q99873 361 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms