RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 ABCD1P33897 745 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 LONP1P36776 959 aaKnown RBP16.67■□□□□ 0.26
MRPL55-231ENST00000492170 CCR2P41597 374 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 AARSP49588 968 aaKnown RBP eCLIP16.67■□□□□ 0.26
MRPL55-231ENST00000492170 ZNF131P52739 623 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 PLD1Q13393 1074 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 ZBTB6Q15916 424 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 NELL2Q99435 816 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 MSTO1Q9BUK6 570 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 ZHX3Q9H4I2 956 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 BRD9Q9H8M2 597 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 FBXO4Q9UKT5 387 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 MRPS17Q9Y2R5 130 aaKnown RBP16.67■□□□□ 0.26
MRPL55-231ENST00000492170 MTF2Q9Y483 593 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-231ENST00000492170 YIPF1Q9Y548 306 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 TIMM13Q9Y5L4 95 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-231ENST00000492170 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
MRPL55-231ENST00000492170 COL4A3Q01955 1670 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 TRAK2O60296 914 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 MYL4P12829 197 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 CD72P21854 359 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 TARSP26639 723 aaKnown RBP16.66■□□□□ 0.26
MRPL55-231ENST00000492170 FOXK2Q01167 660 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 CUL4AQ13619 759 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 GRM2Q14416 872 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 MCM6Q14566 821 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 KARSQ15046 597 aaKnown RBP16.66■□□□□ 0.26
MRPL55-231ENST00000492170 ENOX2Q16206 610 aaKnown RBP16.66■□□□□ 0.26
MRPL55-231ENST00000492170 POTEHQ6S545 545 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 CD302Q8IX05 232 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 HS6ST3Q8IZP7 471 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 TMEM130Q8N3G9 435 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 RAD54LQ92698 747 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 HINFPQ9BQA5 517 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 TRMT61BQ9BVS5 477 aaKnown RBP16.66■□□□□ 0.26
MRPL55-231ENST00000492170 HEBP1Q9NRV9 189 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 BLOC1S4Q9NUP1 217 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 CEP72Q9P209 647 aa16.66■□□□□ 0.26
MRPL55-231ENST00000492170 CACNA1IQ9P0X4 2223 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 EP300Q09472 2414 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-231ENST00000492170 A0A0B4J269 797 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 FAM189A1O60320 539 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 KINO60870 393 aaKnown RBP16.65■□□□□ 0.26
MRPL55-231ENST00000492170 OR4Q2P0C623 313 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 TYMPP19971 482 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 PAX3P23760 479 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 GUCY2FP51841 1108 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 EPHA5P54756 1037 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 ZNF528Q3MIS6 628 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 SPATA1Q5VX52 437 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 OVOS1Q6IE37 1185 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 MAP4K3Q8IVH8 894 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 MAML2Q8IZL2 1156 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-231ENST00000492170 LRRC15Q8TF66 581 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 LARP4BQ92615 738 aaKnown RBP16.65■□□□□ 0.26
MRPL55-231ENST00000492170 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 PGLYRP2Q96PD5 576 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 SLITRK6Q9H5Y7 841 aa16.65■□□□□ 0.26
MRPL55-231ENST00000492170 FRYLO94915 3013 aa16.64■□□□□ 0.26
MRPL55-231ENST00000492170 MOSPD3O75425 235 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 ADRB2P07550 413 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 ODC1P11926 461 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 PSMC3P17980 439 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 RPS9P46781 194 aaKnown RBP16.64■□□□□ 0.25
MRPL55-231ENST00000492170 ALDH1A3P47895 512 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 ID4P47928 161 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 MYBPC2Q14324 1141 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
MRPL55-231ENST00000492170 JADE1Q6IE81 842 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-231ENST00000492170 IRF7Q92985 503 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 CLDN23Q96B33 292 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 BORCS6Q96GS4 357 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 GPR88Q9GZN0 384 aa16.64■□□□□ 0.25
MRPL55-231ENST00000492170 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
MRPL55-231ENST00000492170 MAN2B1O00754 1011 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 NRG2O14511 850 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-231ENST00000492170 SPTLC1O15269 473 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 GJA1P17302 382 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 GDI1P31150 447 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 EPHB3P54753 998 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 LILRA4P59901 499 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 GTF2BQ00403 316 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 CSTF1Q05048 431 aaKnown RBP16.63■□□□□ 0.25
MRPL55-231ENST00000492170 GRIN1Q05586 938 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 DUSP4Q13115 394 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 GPR17Q13304 367 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 TEAD2Q15562 447 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 ARMCX5Q6P1M9 558 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 SLC39A4Q6P5W5 647 aa16.63■□□□□ 0.25
MRPL55-231ENST00000492170 VITQ6UXI7 678 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms