RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 MARCH6O60337 910 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 DGAT1O75907 488 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 KIF4AO95239 1232 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 ABCG1P45844 678 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 IRX4P78413 519 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 TUSC3Q13454 348 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 NAB2Q15742 525 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 CEP57Q86XR8 500 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 ATG2BQ96BY7 2078 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 A0A087WWV3 80 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 DTNBO60941 627 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 MICAL2O94851 1124 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 IGFBP6P24592 240 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 CFHR1Q03591 330 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 VITQ6UXI7 678 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 SLFN12Q8IYM2 578 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 SLC7A14Q8TBB6 771 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 ASB16Q96NS5 453 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 PRORYQ9H606 182 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 SPTAN1Q13813 2472 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-228ENST00000492150 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 ZNF263O14978 683 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 RHOP08100 348 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 OR1D2P34982 312 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 RARRES1P49788 294 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 RAB33AQ14088 237 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 PMS2CLQ68D20 193 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 RALGPS2Q86X27 583 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 FZD8Q9H461 694 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 GPRC5CQ9NQ84 441 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 SLC8A2Q9UPR5 921 aa12.9□□□□□ -0.34
CACNA1C-228ENST00000492150 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 ATG13O75143 517 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 WISP1O95388 367 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 THP07101 528 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 CEBPBP17676 345 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 FGFR3P22607 806 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 CTHP32929 405 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 FAM193AP78312 1265 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 FAM187BQ17R55 369 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 CDCA2Q69YH5 1023 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 TXNDC11Q6PKC3 985 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 CSGALNACT1Q8TDX6 532 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 TRPV4Q9HBA0 871 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
CACNA1C-228ENST00000492150 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 SPECC1L-ADORA2AF8WAN1 911 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 KRT38O76015 456 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 RECQL4O94761 1208 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 REC8O95072 547 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 EDN1P05305 212 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 SCRN1Q12765 414 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 NR5A1Q13285 461 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 MAEAQ7L5Y9 396 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 CYP2U1Q7Z449 544 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 MFSD6LQ8IWD5 586 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 TM6SF1Q9BZW5 370 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 MTRRQ9UBK8 725 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
CACNA1C-228ENST00000492150 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 WNT7AO00755 349 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 NRG2O14511 850 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 N4BP3O15049 544 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 CDKL5O76039 1030 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 XBP1P17861 261 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 KPNA1P52294 538 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms