RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 LRRC53A6NM62 1247 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 GOLGA6L6A8MZA4 724 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 I3L4J1 428 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 B4GALT3O60512 393 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 CXCL10P02778 98 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 THP07101 528 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 TPM1P09493 284 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 CLCNKBP51801 687 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 NOP14P78316 857 aaKnown RBP11.56□□□□□ -0.56
ATF3-209ENST00000492118 SURF1Q15526 300 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 ICE2Q659A1 982 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 E4F1Q66K89 784 aaPredicted RBP11.56□□□□□ -0.56
ATF3-209ENST00000492118 GLB1LQ6UWU2 654 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 C15orf39Q6ZRI6 1047 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 ZNF365Q70YC5 407 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
ATF3-209ENST00000492118 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 SPAG5Q96R06 1193 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 IMPG2Q9BZV3 1241 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 PLEKHA5Q9HAU0 1116 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 APEX2Q9UBZ4 518 aa11.56□□□□□ -0.56
ATF3-209ENST00000492118 PDE4DIPQ5VU43 2346 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 AKR1B15C9JRZ8 316 aaPredicted RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 ZNF623O75123 536 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 OFD1O75665 1012 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 SKILP12757 684 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 SSTR3P32745 418 aaPredicted RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 GTF2H1P32780 548 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 CDH8P55286 799 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 FPGSQ05932 587 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 TBX2Q13207 712 aaPredicted RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 CNKSR3Q6P9H4 555 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 TC2NQ8N9U0 490 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 BEST2Q8NFU1 509 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 APBB2Q92870 758 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 HPDLQ96IR7 371 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 NT5C1BQ96P26 610 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 PPP1R9BQ96SB3 815 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 HTATIP2Q9BUP3 242 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 GANQ9H2C0 597 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 DNAJB4Q9UDY4 337 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 C2CD2Q9Y426 696 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 MICAL3Q7RTP6 2002 aa11.55□□□□□ -0.56
ATF3-209ENST00000492118 TDRD15B5MCY1 1934 aaKnown RBP11.55□□□□□ -0.56
ATF3-209ENST00000492118 NT5C1B-RDH14C9J2C7 533 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 SMAPO00193 183 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 ZC3H11AO75152 810 aaKnown RBP eCLIP11.54□□□□□ -0.56
ATF3-209ENST00000492118 GFPT2O94808 682 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 KRT5P13647 590 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 DRAP1Q14919 205 aaPredicted RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 DPY19L2P1Q6NXN4 242 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 CCDC150Q8NCX0 1101 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 PPP1R10Q96QC0 940 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 TTYH3Q9C0H2 523 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 GIT1Q9Y2X7 761 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 PRG3Q9Y2Y8 225 aaPredicted RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 GTPBP10A4D1E9 387 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 FOXN3O00409 490 aaPredicted RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 MFAP3LO75121 409 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 DDHD2O94830 711 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 CSPG5O95196 566 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 BCAR1P56945 870 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 POU5F1Q01860 360 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 ZBTB6Q15916 424 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 NOMO2Q5JPE7 1267 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 C1QTNF12Q5T7M4 302 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
ATF3-209ENST00000492118 RPUSD2Q8IZ73 545 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 LSM14AQ8ND56 463 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 KREMEN1Q96MU8 473 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.569e-6■■■■■ 27.7
ATF3-209ENST00000492118 XYLT2Q9H1B5 865 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 TMEM161AQ9NX61 479 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 TIMM13Q9Y5L4 95 aaPredicted RBP11.54□□□□□ -0.56
ATF3-209ENST00000492118 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 CHD9Q3L8U1 2897 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 ITIH6Q6UXX5 1313 aa11.54□□□□□ -0.56
ATF3-209ENST00000492118 SZT2Q5T011 3432 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 SPTLC1O15269 473 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 HCRTO43612 131 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 EOMESO95936 686 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 ITGB1P05556 798 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 SKIP12755 728 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 KCNE1P15382 129 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 OR1G1P47890 313 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 WDR5P61964 334 aaKnown RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 FAM189BP81408 668 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 RBP5P82980 135 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms