RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 UBE2HP62256 183 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 KYAT1Q16773 422 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 SLC5A9Q2M3M2 681 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 FGF13Q92913 245 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 DHX58Q96C10 678 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 RPF1Q9H9Y2 349 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 PIRO00625 290 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 OAZ2O95190 189 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 ATF2P15336 505 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 SYKP43405 635 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 ARPP19P56211 112 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 CWF19L1Q69YN2 538 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 RTL10Q7L3V2 364 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 TCEAL8Q8IYN2 117 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 FGF14Q92915 247 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 MRPL44Q9H9J2 332 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 OLFML3Q9NRN5 406 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 SEL1LQ9UBV2 794 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SEC61A1-206ENST00000491668 SCN1AP35498 2009 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 ANO9A1A5B4 782 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 KRBA1A5PL33 1030 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 H7C4K7 107 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 PI15O43692 258 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 XYLBO75191 536 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 GAP43P17677 238 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 NDUFA8P51970 172 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 LILRA4P59901 499 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 APPL2Q8NEU8 664 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 BEST2Q8NFU1 509 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 TSPAN18Q96SJ8 248 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 CUEDC2Q9H467 287 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 AGO2Q9UKV8 859 aaKnown RBP13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 TSC2P49815 1807 aa13.76□□□□□ -0.21
SEC61A1-206ENST00000491668 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 RHOP08100 348 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 CFHP08603 1231 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 IDEP14735 1019 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ABCD1P33897 745 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 HOXD13P35453 343 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 CCR2P41597 374 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 L1TD1Q5T7N2 865 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 TPGS2Q68CL5 300 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 CD302Q8IX05 232 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 SIX5Q8N196 739 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ING5Q8WYH8 240 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 NXPE3Q969Y0 559 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 FAM84AQ96KN4 292 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 LRRC27Q9C0I9 530 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 GOLPH3LQ9H4A5 285 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ASB7Q9H672 318 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 AVENQ9NQS1 362 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 DERAQ9Y315 318 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 INSL5Q9Y5Q6 135 aa13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-206ENST00000491668 FRYLO94915 3013 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 PRRG1O14668 218 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 GCNT3O95395 438 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 SRFP11831 508 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 CEBPBP17676 345 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 CLCN5P51795 746 aa13.74□□□□□ -0.21
SEC61A1-206ENST00000491668 AMPD3Q01432 767 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms