RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 KIAA1024Q9UPX6 916 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PP2D1A8MPX8 630 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 TMEM189-UBE2V1I3L0A0 370 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ARNTLO00327 626 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PODXLO00592 558 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PRRG1O14668 218 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ZIC2O95409 532 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 CAPNS1P04632 268 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 GJA1P17302 382 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 HOXC13P31276 330 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 MLLT6P55198 1093 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PPP2R5AQ15172 486 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 SAFBQ15424 915 aaKnown RBP eCLIP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ZNF568Q3ZCX4 644 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ANKS3Q6ZW76 656 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ERMNQ8TAM6 284 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 FAM3CQ92520 227 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ZBTB45Q96K62 511 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 RUSC1Q9BVN2 902 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 CYP4F11Q9HBI6 524 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PCDHGA5Q9Y5G8 931 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 BACE2Q9Y5Z0 518 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 PIAS3Q9Y6X2 628 aa12.15□□□□□ -0.46
NCSTN-214ENST00000491390 NCANO14594 1321 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 HECTD1Q9ULT8 2610 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 SFI1A8K8P3 1242 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 E9PMD0 336 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 K7ERI5 159 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 AXIN1O15169 862 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 HIP1RO75146 1068 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 SEC24BO95487 1268 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 LRG1P02750 347 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 CDC25AP30304 524 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 NPTX2P47972 431 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
NCSTN-214ENST00000491390 CDR1P51861 262 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 SPAG1Q07617 926 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 FAM78AQ5JUQ0 283 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 CEP68Q76N32 757 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 DAW1Q8N136 415 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 C4orf32Q8N8J7 132 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 ZSWIM3Q96MP5 696 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 BRD9Q9H8M2 597 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 ZNF334Q9HCZ1 680 aaPredicted RBP12.14□□□□□ -0.47
NCSTN-214ENST00000491390 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 CITO14578 2027 aa12.14□□□□□ -0.47
NCSTN-214ENST00000491390 SLC16A4O15374 487 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 PTPN2P17706 415 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 ELF1P32519 619 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 VIPR2P41587 438 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 GRM5P41594 1212 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 EFNA5P52803 228 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 YARSP54577 528 aaKnown RBP12.13□□□□□ -0.47
NCSTN-214ENST00000491390 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 HEATR6Q6AI08 1181 aaKnown RBP12.13□□□□□ -0.47
NCSTN-214ENST00000491390 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 Q6ZS52 159 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 KCNK18Q7Z418 384 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 ZNF461Q8TAF7 563 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 SNX29Q8TEQ0 813 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 GAB3Q8WWW8 586 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 KIFAP3Q92845 792 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 IRF7Q92985 503 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
NCSTN-214ENST00000491390 UROC1Q96N76 676 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
NCSTN-214ENST00000491390 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 PTPRHQ9HD43 1115 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 VPS45Q9NRW7 570 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 TUBGCP4Q9UGJ1 667 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 NEUROG3Q9Y4Z2 214 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 INSL5Q9Y5Q6 135 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
NCSTN-214ENST00000491390 CCDC163A0A0D9SF12 145 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 ABLIM1O14639 778 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 TRAPPC3O43617 180 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 MOSPD3O75425 235 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 ABLIM3O94929 683 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 MYL4P12829 197 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 CEACAM1P13688 526 aa12.12□□□□□ -0.47
NCSTN-214ENST00000491390 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms