RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CPT1AP50416 773 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SOX10P56693 466 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 COPS2P61201 443 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZIM3Q96PE6 472 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 NIFKQ9BYG3 293 aaKnown RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 OSBPL8Q9BZF1 889 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TAF1P21675 1872 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 USP2O75604 605 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 CYP1A2P05177 515 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 FAM102AQ5T9C2 384 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NOTUMQ6P988 496 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NOP9Q86U38 636 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 TATDN2Q93075 761 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MRRFQ96E11 262 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 RABEP2Q9H5N1 569 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 DMGDHQ9UI17 866 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 I3L4J1 428 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF263O14978 683 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 TROVE2P10155 538 aaKnown RBP eCLIP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 PNPLA4P41247 253 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MSH2P43246 934 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NLRP11P59045 1033 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MCL1Q07820 350 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 STAT4Q14765 748 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ASAP3Q8TDY4 903 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 FBF1Q8TES7 1133 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 CDKL2Q92772 493 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MCEEQ96PE7 176 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NTPCRQ9BSD7 190 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ASB7Q9H672 318 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF446Q9NWS9 450 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 PCDHA3Q9Y5H8 950 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 KIAA1551Q9HCM1 1747 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MYO5AQ9Y4I1 1855 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 OPLAHO14841 1288 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 SUN1O94901 812 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZBED1O96006 694 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 HSPA9P38646 679 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ASTE1Q2TB18 679 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ARL13BQ3SXY8 428 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 IZUMO3Q5VZ72 239 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 TTC19Q6DKK2 380 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF354CQ86Y25 554 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MGARPQ8TDB4 240 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 PYROXD1Q8WU10 500 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 FAM149B1Q96BN6 582 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 HPDLQ96IR7 371 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF668Q96K58 619 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MTMR12Q9C0I1 747 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 KLC2Q9H0B6 622 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 SAYSD1Q9NPB0 183 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 WHRNQ9P202 907 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 RIPK3Q9Y572 518 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 A8MXQ7 604 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 DYNC1LI2O43237 492 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ACSL3O95573 720 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 RPLP2P05387 115 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 INHBAP08476 426 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 VDRP11473 427 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 MAGOHP61326 146 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 YWHAGP61981 247 aaKnown RBP eCLIP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 BASP1P80723 227 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 LLGL1Q15334 1064 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 KLHL38Q2WGJ6 581 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 TWF2Q6IBS0 349 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 CYP4F22Q6NT55 531 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF410Q86VK4 478 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 EXD1Q8NHP7 514 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 NSMCE1Q8WV22 266 aa7.77□□□□□ -1.17
NPHP3-208ENST00000490993 RRP15Q9Y3B9 282 aaKnown RBP7.77□□□□□ -1.17
NPHP3-208ENST00000490993 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TISP43B9A030 160 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 POC1B-GALNT4F8VUJ3 575 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 IRF6O14896 467 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 DHX15O43143 795 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ABL1P00519 1130 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ACADSBP45954 432 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 DGKZQ13574 1117 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CASC4Q6P4E1 433 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 DSTYKQ6XUX3 929 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TRIM42Q8IWZ5 723 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CTAGE3PQ8IX95 158 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 HES6Q96HZ4 224 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 FAM193BQ96PV7 902 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 NGRNQ9NPE2 291 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ITGA11Q9UKX5 1188 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TTC7AQ9ULT0 858 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 STAP1Q9ULZ2 295 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 LY75O60449 1722 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PDHXO00330 501 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PDE2AO00408 941 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 FARP2O94887 1054 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 GLI1P08151 1106 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 STAG3L1P0CL83 205 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms