RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 SPTLC1O15269 473 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 KLRC4O43908 158 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 MYL1P05976 194 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 ATF2P15336 505 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 AFMP43652 599 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 SNRPFP62306 86 aaKnown RBP16.47■□□□□ 0.23
COL27A1-206ENST00000490831 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 CTXN3Q4LDR2 81 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 ARMCX5Q6P1M9 558 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 TRIM67Q6ZTA4 783 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 SLC7A14Q8TBB6 771 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 DPP3Q9NY33 737 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
COL27A1-206ENST00000490831 EPS15L1Q9UBC2 864 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 DOCK8Q8NF50 2099 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 XYLBO75191 536 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 CYP11A1P05108 521 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 YWHAHQ04917 246 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-206ENST00000490831 SIGLEC14Q08ET2 396 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 BMP8AQ7Z5Y6 402 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 GPD1LQ8N335 351 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 SENP8Q96LD8 212 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL27A1-206ENST00000490831 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 SORCS3Q9UPU3 1222 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 SCN1AP35498 2009 aa16.46■□□□□ 0.23
COL27A1-206ENST00000490831 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 OR6C75A6NL08 312 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 COL9A1P20849 921 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 NUCB2P80303 420 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 DSTYKQ6XUX3 929 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 CXorf38Q8TB03 319 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 BORCS6Q96GS4 357 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 MYADMQ96S97 322 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 PCIF1Q9H4Z3 704 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 AGPAT3Q9NRZ7 376 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 HSPBP1Q9NZL4 362 aa16.45■□□□□ 0.22
COL27A1-206ENST00000490831 CGNQ9P2M7 1197 aaKnown RBP16.45■□□□□ 0.22
COL27A1-206ENST00000490831 AFF4Q9UHB7 1163 aaKnown RBP16.45■□□□□ 0.22
COL27A1-206ENST00000490831 TIMM13Q9Y5L4 95 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-206ENST00000490831 GOLGA8IPA6NC78 632 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 GOLGA8JA6NMD2 632 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 CCL16O15467 120 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 ASGR2P07307 311 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 ODC1P11926 461 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 SYKP43405 635 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 TAF6P49848 677 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 NDUFA8P51970 172 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 PSMD2Q13200 908 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 MYBPC2Q14324 1141 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 GRASPQ7Z6J2 395 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-206ENST00000490831 USP37Q86T82 979 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 C1orf127Q8N9H9 656 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 CACTINQ8WUQ7 758 aaKnown RBP16.44■□□□□ 0.22
COL27A1-206ENST00000490831 PDE11AQ9HCR9 933 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 SLC39A2Q9NP94 309 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-206ENST00000490831 IGSF9Q9P2J2 1179 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 DSEQ9UL01 958 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 ZFP37Q9Y6Q3 630 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-206ENST00000490831 TSC2P49815 1807 aa16.44■□□□□ 0.22
COL27A1-206ENST00000490831 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 TMEM221A6NGB7 291 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ZNF233A6NK53 670 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 M0R296 226 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 SEC24AO95486 1093 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 LAMP2P13473 410 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 FSHRP23945 695 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ELF1P32519 619 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 PNPLA4P41247 253 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ARPP19P56211 112 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 GPR17Q13304 367 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 SURF1Q15526 300 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
COL27A1-206ENST00000490831 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 HFE2Q6ZVN8 426 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 CBWD2Q8IUF1 395 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 TMEM174Q8WUU8 243 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 NXPE3Q969Y0 559 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ZNF560Q96MR9 790 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 KCNK12Q9HB15 430 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ITGA11Q9UKX5 1188 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ARIH1Q9Y4X5 557 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms