RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 SEMA4DQ92854 862 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 BADQ92934 168 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 ACAP3Q96P50 834 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 SELENOOQ9BVL4 669 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CELF4Q9BZC1 486 aaKnown RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 PPP1R12CQ9BZL4 782 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 PDCL3Q9H2J4 239 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 PLEKHA5Q9HAU0 1116 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 TOPORSQ9NS56 1045 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 DERAQ9Y315 318 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 HYOU1Q9Y4L1 999 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 TRPV2Q9Y5S1 764 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 VCANP13611 3396 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 A0A1B0GUA9 196 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 GPR182O15218 404 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 MOCS3O95396 460 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 STAG3L1P0CL83 205 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 MCM3P25205 808 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 TFAMQ00059 246 aaKnown RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 CDR2Q01850 454 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 MGAT3Q09327 533 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 HIC1Q14526 733 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 CCDC181Q5TID7 509 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 SLC27A1Q6PCB7 646 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 GLYCTKQ8IVS8 523 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF516Q92618 1163 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 CDX2Q99626 313 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 CARD6Q9BX69 1037 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 TRIM6Q9C030 488 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 GPR88Q9GZN0 384 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 HAPLN2Q9GZV7 340 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 CDT1Q9H211 546 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 AJAP1Q9UKB5 411 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
HDAC3-210ENST00000490808 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-210ENST00000490808 MYH10P35580 1976 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CES2O00748 559 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 ABLIM1O14639 778 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CYP26A1O43174 497 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 FGBP02675 491 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 MYBL1P10243 752 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CSF2RAP15509 400 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CYP11B1P15538 503 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-210ENST00000490808 EIF4BP23588 611 aaKnown RBP10.97□□□□□ -0.65
HDAC3-210ENST00000490808 TNFSF9P41273 254 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 GRM5P41594 1212 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 GALCP54803 685 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CCL23P55773 120 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 NOP14P78316 857 aaKnown RBP10.97□□□□□ -0.65
HDAC3-210ENST00000490808 GPC5P78333 572 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CUL2Q13617 745 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 IKBKEQ14164 716 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF699Q32M78 642 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 TRAF7Q6Q0C0 670 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 RUFY4Q6ZNE9 571 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
HDAC3-210ENST00000490808 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 TATDN2Q93075 761 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 PBKQ96KB5 322 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-210ENST00000490808 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 PCDHB4Q9Y5E5 795 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 EYSQ5T1H1 3165 aa10.97□□□□□ -0.65
HDAC3-210ENST00000490808 NCANO14594 1321 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 A0A0U1RQJ8 604 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 B4GALT5O43286 388 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 MED7O43513 233 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 BUB1O43683 1085 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 FAM189A1O60320 539 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 TSPAN1O60635 241 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 ABL1P00519 1130 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 ASS1P00966 412 aaKnown RBP10.96□□□□□ -0.65
HDAC3-210ENST00000490808 CHRNA1P02708 482 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
HDAC3-210ENST00000490808 ATF7P17544 494 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-210ENST00000490808 ITGB8P26012 769 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.65
HDAC3-210ENST00000490808 MYO1EQ12965 1108 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 TMEM132DQ14C87 1099 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 TCEAL1Q15170 157 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 AMHR2Q16671 573 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms