RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TNFSF13BQ9Y275 285 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 VWA8A3KMH1 1905 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RIF1Q5UIP0 2472 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 MTCL1Q9Y4B5 1905 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 SMIM28A0A1B0GU29 152 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 VPS37CA5D8V6 355 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 TGM5O43548 720 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 N4BP1O75113 896 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 URODP06132 367 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 SRGAP2BP0DMP2 458 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 NPR3P17342 541 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 SYT1P21579 422 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 PROZP22891 400 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 GUCY2CP25092 1073 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 MTHFRP42898 656 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 MCM2P49736 904 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 CLCNKBP51801 687 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 NTHL1P78549 312 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 CEBPZQ03701 1054 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 ITIH3Q06033 890 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RESTQ13127 1097 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 GIT2Q14161 759 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 KARSQ15046 597 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 SLC10A6Q3KNW5 377 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 USP41Q3LFD5 358 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 XKR4Q5GH76 650 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 ZBTB41Q5SVQ8 909 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 KIAA1841Q6NSI8 718 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 HACE1Q8IYU2 909 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 C3orf58Q8NDZ4 430 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 TMEM161BQ8NDZ6 487 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RSAD2Q8WXG1 361 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RSPH1Q8WYR4 309 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 C18orf25Q96B23 403 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 ZNF707Q96C28 371 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 EPSTI1Q96J88 318 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RIPOR3Q96MK2 946 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 PANK2Q9BZ23 570 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 RAB34Q9BZG1 259 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 MYH11P35749 1972 aa8.02□□□□□ -1.13
PRPF4B-208ENST00000490653 ESPNB1AK53 854 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 PI15O43692 258 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 MAPTP10636 758 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 PLS3P13797 630 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 PLCG1P19174 1290 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 TKTP29401 623 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 NMT1P30419 496 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 NBL1P41271 181 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 GUCY2FP51841 1108 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 EFNA5P52803 228 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 DCAF4L1Q3SXM0 396 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 ZNF568Q3ZCX4 644 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 ARL6IP4Q66PJ3 421 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 CWF19L1Q69YN2 538 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 PPFIBP1Q86W92 1011 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 GPBP1Q86WP2 473 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 SUGP1Q8IWZ8 645 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 MYADMQ96S97 322 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 REEP2Q9BRK0 252 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 ADPGKQ9BRR6 497 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 TCHPQ9BT92 498 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 MRPL4Q9BYD3 311 aaKnown RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 NT5C3AQ9H0P0 336 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 DZANK1Q9NVP4 752 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 FNIP2Q9P278 1114 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 MTMR6Q9Y217 621 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 PTPRZ1P23471 2315 aaPredicted RBP8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 ZNF292O60281 2723 aa8.01□□□□□ -1.13
PRPF4B-208ENST00000490653 A0A087X0B3 334 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 FSD2A1L4K1 749 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 TISP43B9A030 160 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 ANKRD63C9JTQ0 380 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 NARSO43776 548 aaKnown RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 B3GAT3O94766 335 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 GLUD1P00367 558 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 FGFR3P22607 806 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 UBA7P41226 1012 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 TNFSF9P41273 254 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 NCKAP1LP55160 1127 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 DMP1Q13316 513 aaPredicted RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 PSMD5Q16401 504 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 UPP1Q16831 310 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 ZC2HC1CQ53FD0 456 aaPredicted RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 SLC39A4Q6P5W5 647 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 DCLRE1AQ6PJP8 1040 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 HAUS6Q7Z4H7 955 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 FRMD5Q7Z6J6 570 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 ZDHHC14Q8IZN3 488 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 SMG7Q92540 1137 aaKnown RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 RAD54LQ92698 747 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 ATOH1Q92858 354 aaPredicted RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 CDK5RAP3Q96JB5 506 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms