RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-210	ENST00000490546	NAB2	Q15742	525 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	UPP1	Q16831	310 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	ARHGAP44	Q17R89	818 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	FIGN	Q5HY92	759 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	SPOPL	Q6IQ16	392 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	RRAGA	Q7L523	313 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	METTL23	Q86XA0	190 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	TATDN2	Q93075	761 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	ZNF689	Q96CS4	500 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	ZNF558	Q96NG5	402 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	NIF3L1	Q9GZT8	377 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	NUCKS1	Q9H1E3	243 aa	Known RBP	11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	VRTN	Q9H8Y1	702 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	CYP3A43	Q9HB55	503 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	NLRC4	Q9NPP4	1024 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	FBXL5	Q9UKA1	691 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	DNAJC12	Q9UKB3	198 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	PCDHB12	Q9Y5F1	795 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546	SNX9	Q9Y5X1	595 aa		11.1	□□□□□ -0.63
PUM1-210	ENST00000490546		A0A1W2PQJ5	194 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CYB561D2	O14569	222 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	NRP1	O14786	923 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	PPEF2	O14830	753 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GALT	P07902	379 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CCDC172	P0C7W6	258 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	USP8	P40818	1118 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	STAT1	P42224	750 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	SLC11A1	P49279	550 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	BCAR1	P56945	870 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GSDMD	P57764	484 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	HTRA4	P83105	476 aa	Predicted RBP	11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	ZBED6	P86452	979 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GCNT1	Q02742	428 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	MLLT1	Q03111	559 aa	Predicted RBP	11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CCDC173	Q0VFZ6	552 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	ELAVL2	Q12926	359 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CUL2	Q13617	745 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	C9orf50	Q5SZB4	431 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	RASIP1	Q5U651	963 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	IQCE	Q6IPM2	695 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	PHLDB3	Q6NSJ2	640 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	SCARA5	Q6ZMJ2	495 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CNGA4	Q8IV77	575 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	ARHGEF19	Q8IW93	802 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	APPL2	Q8NEU8	664 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CXorf38	Q8TB03	319 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	RABGGTA	Q92696	567 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	JAKMIP2	Q96AA8	810 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GDF15	Q99988	308 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	STK33	Q9BYT3	514 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	XYLT2	Q9H1B5	865 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GAN	Q9H2C0	597 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	SNX25	Q9H3E2	840 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	APOBEC3G	Q9HC16	384 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	SIX2	Q9NPC8	291 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	GDAP2	Q9NXN4	497 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	DNAJB4	Q9UDY4	337 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	CAPN11	Q9UMQ6	739 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	FHOD1	Q9Y613	1164 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	MYO9B	Q13459	2157 aa		11.09	□□□□□ -0.63
PUM1-210	ENST00000490546	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	TMEM189-UBE2V1	I3L0A0	370 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	NRDC	O43847	1150 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	LRRN2	O75325	713 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	NOL4	O94818	638 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	FAM163B	P0C2L3	166 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	ODC1	P11926	461 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	KRT5	P13647	590 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	CASP14	P31944	242 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	BMP8B	P34820	402 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	KRT9	P35527	623 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	PPM1A	P35813	382 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	APBA1	Q02410	837 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	KRT17	Q04695	432 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	DRAP1	Q14919	205 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	SFMBT2	Q5VUG0	894 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	GJB7	Q6PEY0	223 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	KCNT2	Q6UVM3	1135 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	DPH6	Q7L8W6	267 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	TMEM86A	Q8N2M4	240 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	TMEM130	Q8N3G9	435 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	TOP6BL	Q8N6T0	577 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	OR8K1	Q8NGG5	319 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	ELMO3	Q96BJ8	720 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	SENP8	Q96LD8	212 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	PAAF1	Q9BRP4	392 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	CWH43	Q9H720	699 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	SPG21	Q9NZD8	308 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	CACNG4	Q9UBN1	327 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	MSRA	Q9UJ68	235 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	ADAM28	Q9UKQ2	775 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	DSE	Q9UL01	958 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	MYO6	Q9UM54	1294 aa		11.08	□□□□□ -0.64
PUM1-210	ENST00000490546	POLI	Q9UNA4	740 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms