RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SPECC1L-ADORA2AF8WAN1 911 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 H0Y626 953 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 IFIT3O14879 490 aaKnown RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 DCLK1O15075 740 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 OIP5O43482 229 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 MOSPD3O75425 235 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 MICAL2O94851 1124 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 STBD1O95210 358 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 TRIM16O95361 564 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 ITGA4P13612 1032 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 COL8A1P27658 744 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 PDE1AP54750 535 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 FAM193AP78312 1265 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 FCHO2Q0JRZ9 810 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 UAP1L1Q3KQV9 507 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 PLA2G4DQ86XP0 818 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 MFSD6LQ8IWD5 586 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 TRIM22Q8IYM9 498 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 CMTR1Q8N1G2 835 aaKnown RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 UBL7Q96S82 380 aaPredicted RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 TTPALQ9BTX7 342 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 EIF2AQ9BY44 585 aaKnown RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 C8orf33Q9H7E9 229 aaPredicted RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 UBN1Q9NPG3 1134 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 TBC1D22BQ9NU19 505 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 CACNG4Q9UBN1 327 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 HES2Q9Y543 173 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 BOD1L1Q8NFC6 3051 aa7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 KIF26AQ9ULI4 1882 aaPredicted RBP7.96□□□□□ -1.14
PDLIM1-203ENST00000490391 DOPEY1Q5JWR5 2465 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 KNTC1P50748 2209 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 CCDC194A0A1B0GVG4 234 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ARHGEF37A1IGU5 675 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 TMEM150BA6NC51 233 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 UPK3BL1B0FP48 263 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 UPK3BL2E5RIL1 263 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF263O14978 683 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 KHNYNO15037 678 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 MEFVO15553 781 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 MAFO75444 373 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 FOSP01100 380 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 PTPN2P17706 415 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 OR1D2P34982 312 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ANTXR2P58335 489 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 IRX4P78413 519 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 SEMA3BQ13214 749 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 PON2Q15165 354 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ELF2Q15723 593 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 FAM171A1Q5VUB5 890 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 FOXD4L5Q5VV16 416 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 CATIPQ7Z7H3 387 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 RALGPS2Q86X27 583 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 RHPN2Q8IUC4 686 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 CNNM3Q8NE01 707 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 MDM1Q8TC05 714 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 LZTS2Q9BRK4 669 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF577Q9BSK1 485 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 NIFKQ9BYG3 293 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 SLC32A1Q9H598 525 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF395Q9H8N7 513 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 RIC8AQ9NPQ8 531 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 NRBP2Q9NSY0 501 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 POLR3BQ9NW08 1133 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 SUCLA2Q9P2R7 463 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 MKL2Q9ULH7 1088 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 DOPEY2Q9Y3R5 2298 aa7.95□□□□□ -1.14
PDLIM1-203ENST00000490391 TNRC6BQ9UPQ9 1833 aaKnown RBP7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 BSNQ9UPA5 3926 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 PTPRBP23467 1997 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 HEPACAM2A8MVW5 462 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CHADO15335 359 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 TADA2AO75478 443 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 DDAH1O94760 285 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 RHOBTB1O94844 696 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 KIF4AO95239 1232 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CYP3A4P08684 503 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 SDSP20132 328 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 HSP90AA2PQ14568 343 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 PMS2CLQ68D20 193 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 WWC2Q6AWC2 1192 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CCNI2Q6ZMN8 369 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF843Q8N446 348 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CAMKK1Q8N5S9 505 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CSGALNACT1Q8TDX6 532 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 IGDCC4Q8TDY8 1250 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 HASPINQ8TF76 798 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 LENG9Q96B70 501 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 NLRP4Q96MN2 994 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 SH2D3AQ9BRG2 576 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 APOL6Q9BWW8 343 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms