RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.61
SEC13-218ENST00000490283 KRT85P78386 507 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 RESP18Q5W5W9 173 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 OVOS1Q6IE37 1185 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 TCEAL8Q8IYN2 117 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 SAAL1Q96ER3 474 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 C7orf25Q9BPX7 421 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 DPP3Q9NY33 737 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 RBAKQ9NYW8 714 aaPredicted RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 AFF4Q9UHB7 1163 aaKnown RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 RCOR1Q9UKL0 485 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 FBXL21Q9UKT6 434 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 CDH7Q9ULB5 785 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 DUSP12Q9UNI6 340 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 TIMM13Q9Y5L4 95 aaPredicted RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 C2orf16Q68DN1 1984 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 TECTAO75443 2155 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 MTCL1Q9Y4B5 1905 aaKnown RBP18.88■□□□□ 0.61
SEC13-218ENST00000490283 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEC13-218ENST00000490283 OAZ2O95190 189 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 PLA2G5P39877 138 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 TAF6P49848 677 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 LILRA4P59901 499 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 NTHL1P78549 312 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 ADCY1Q08828 1119 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 BECN1Q14457 450 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 FAM26FQ5R3K3 315 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 CNNM4Q6P4Q7 775 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 METTL23Q86XA0 190 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 BRSK2Q8IWQ3 736 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 CACTINQ8WUQ7 758 aaKnown RBP18.88■□□□□ 0.61
SEC13-218ENST00000490283 SENP8Q96LD8 212 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 SPATA32Q96LK8 384 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 ZNF560Q96MR9 790 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 PRRX2Q99811 253 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 DSEQ9UL01 958 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 KCNH3Q9ULD8 1083 aa18.88■□□□□ 0.61
SEC13-218ENST00000490283 ANO9A1A5B4 782 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 PIRO00625 290 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 PPEF2O14830 753 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 EXTL3O43909 919 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 PTPN2P17706 415 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 TFAMQ00059 246 aaKnown RBP18.87■□□□□ 0.61
SEC13-218ENST00000490283 PDCD11Q14690 1871 aaKnown RBP18.87■□□□□ 0.61
SEC13-218ENST00000490283 SV2CQ496J9 727 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 IQCEQ6IPM2 695 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 CRELD2Q6UXH1 353 aaPredicted RBP18.87■□□□□ 0.61
SEC13-218ENST00000490283 UNC13DQ70J99 1090 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 MTSS1LQ765P7 747 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 TMEM130Q8N3G9 435 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 CBWD1Q9BRT8 395 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 FGFBP2Q9BYJ0 223 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 SMOC2Q9H3U7 446 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 MRPS23Q9Y3D9 190 aaKnown RBP18.87■□□□□ 0.61
SEC13-218ENST00000490283 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
SEC13-218ENST00000490283 INSL5Q9Y5Q6 135 aa18.87■□□□□ 0.61
SEC13-218ENST00000490283 UBE4BO95155 1302 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 GOLGA8IPA6NC78 632 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 GOLGA8JA6NMD2 632 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 PNPLA4P41247 253 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 AFMP43652 599 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 PLD1Q13393 1074 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 GPD1LQ8N335 351 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 FGF13Q92913 245 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 PCIF1Q9H4Z3 704 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 HCFC1R1Q9NWW0 138 aa18.86■□□□□ 0.61
SEC13-218ENST00000490283 DNMT3BQ9UBC3 853 aaKnown RBP18.86■□□□□ 0.61
SEC13-218ENST00000490283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.85■□□□□ 0.61
SEC13-218ENST00000490283 ZNF197O14709 1029 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 RHOP08100 348 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 RFX1P22670 979 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 MYBPC2Q14324 1141 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 SURF1Q15526 300 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 CYP4A22Q5TCH4 519 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 RNF19BQ6ZMZ0 732 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 EFCAB13Q8IY85 973 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 THEM5Q8N1Q8 247 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 RSAD2Q8WXG1 361 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 HPS3Q969F9 1004 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 ZNF512Q96ME7 567 aaPredicted RBP18.85■□□□□ 0.61
SEC13-218ENST00000490283 CORO1BQ9BR76 489 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 KIAA1586Q9HCI6 787 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 NUMBLQ9Y6R0 609 aa18.85■□□□□ 0.61
SEC13-218ENST00000490283 PVALEFA0A1B0GWK0 134 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 ZNF233A6NK53 670 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 ANHXE9PGG2 379 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 CYB561D2O14569 222 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 SPTLC1O15269 473 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 SEC24AO95486 1093 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 TMEM191BP0C7N4 346 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 SRFP11831 508 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 TWF1Q12792 350 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 GPR17Q13304 367 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 HTR4Q13639 388 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 PDZD4Q76G19 769 aaPredicted RBP18.84■□□□□ 0.61
SEC13-218ENST00000490283 HS2ST1Q7LGA3 356 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 SLC44A3Q8N4M1 653 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 ITFG1Q8TB96 612 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms