RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
NUP58-213ENST00000490231 BRD9Q9H8M2 597 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 TRPV4Q9HBA0 871 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
NUP58-213ENST00000490231 RIF1Q5UIP0 2472 aaKnown RBP17.05■□□□□ 0.32
NUP58-213ENST00000490231 PTPRZ1P23471 2315 aaPredicted RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 LACTBL1A8MY62 500 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 MAN2B1O00754 1011 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 NRG2O14511 850 aaPredicted RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 OGTO15294 1046 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 PSMC3P17980 439 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 UBA7P41226 1012 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 PLD1Q13393 1074 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 FZD5Q13467 585 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 GRM2Q14416 872 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 ENOX2Q16206 610 aaKnown RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 MAP4K3Q8IVH8 894 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 CD302Q8IX05 232 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 NELL1Q92832 810 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 PARVGQ9HBI0 331 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 YIPF1Q9Y548 306 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 TIMM13Q9Y5L4 95 aaPredicted RBP17.04■□□□□ 0.32
NUP58-213ENST00000490231 FAM186AA6NE01 2351 aa17.04■□□□□ 0.32
NUP58-213ENST00000490231 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 K7ENM7 598 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 VNN2O95498 520 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 BMP15O95972 392 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 MYL4P12829 197 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 TYMPP19971 482 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 PAX3P23760 479 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 ABCD1P33897 745 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 MCM2P49736 904 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 GPR17Q13304 367 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 VITQ6UXI7 678 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 USP37Q86T82 979 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 ZNF687Q8N1G0 1237 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 TMEM130Q8N3G9 435 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 MYCT1Q8N699 235 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 ZBTB44Q8NCP5 570 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 LRRC15Q8TF66 581 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 HINFPQ9BQA5 517 aa17.03■□□□□ 0.32
NUP58-213ENST00000490231 RPF1Q9H9Y2 349 aaKnown RBP17.03■□□□□ 0.32
NUP58-213ENST00000490231 ZNF334Q9HCZ1 680 aaPredicted RBP17.03■□□□□ 0.32
NUP58-213ENST00000490231 GVINP1Q7Z2Y8 2422 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 A0A0B4J269 797 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 TRAK2O60296 914 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 FAM13AO94988 1023 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 CD2BP2O95400 341 aaKnown RBP17.02■□□□□ 0.32
NUP58-213ENST00000490231 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.32
NUP58-213ENST00000490231 MYBPC2Q14324 1141 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 SPATA1Q5VX52 437 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 OVOS1Q6IE37 1185 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 MAMSTRQ6ZN01 415 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 ZSCAN18Q8TBC5 510 aaPredicted RBP17.02■□□□□ 0.32
NUP58-213ENST00000490231 ATRIPQ8WXE1 791 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 E2F7Q96AV8 911 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 IER2Q9BTL4 223 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 LRRC3Q9BY71 257 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
NUP58-213ENST00000490231 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 CPSF3Q9UKF6 684 aaKnown RBP17.02■□□□□ 0.32
NUP58-213ENST00000490231 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 CITO14578 2027 aa17.02■□□□□ 0.32
NUP58-213ENST00000490231 ZNF292O60281 2723 aa17.02■□□□□ 0.31
NUP58-213ENST00000490231 LILRB5O75023 590 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 OR4Q2P0C623 313 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 GJA1P17302 382 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 GDI1P31150 447 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 VIPR2P41587 438 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 GUCY2FP51841 1108 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 EPHB3P54753 998 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 LILRA4P59901 499 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 GTF2BQ00403 316 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 DUSP4Q13115 394 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
NUP58-213ENST00000490231 TEAD2Q15562 447 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 TMC8Q8IU68 726 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 SHKBP1Q8TBC3 707 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 RAD54LQ92698 747 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 PGLYRP2Q96PD5 576 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
NUP58-213ENST00000490231 FAM126AQ9BYI3 521 aaPredicted RBP17.01■□□□□ 0.31
NUP58-213ENST00000490231 DNAJC25Q9H1X3 360 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms