RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 SFR1Q86XK3 245 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 BICD1Q96G01 975 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 MSTO1Q9BUK6 570 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 RPF1Q9H9Y2 349 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 OLFML3Q9NRN5 406 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 HCFC1R1Q9NWW0 138 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 GDE1Q9NZC3 331 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 NUMBLQ9Y6R0 609 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 RIF1Q5UIP0 2472 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 TISP43B9A030 160 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PROB1E7EW31 1015 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 SPTLC1O15269 473 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PI15O43692 258 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PPP6R2O75170 966 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 CYP11A1P05108 521 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 KRT18P05783 430 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 RHOP08100 348 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PTPN2P17706 415 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 LILRA4P59901 499 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 KCNA1Q09470 495 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 POSTNQ15063 836 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 E2F4Q16254 413 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 C9orf57Q5W0N0 161 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 ZNF280DQ6N043 979 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 CNNM4Q6P4Q7 775 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 DYMQ7RTS9 669 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 FGF14Q92915 247 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 IKZF4Q9H2S9 585 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
TMEM39A-210ENST00000490099 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 OR6C75A6NL08 312 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 PPEF2O14830 753 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 MOSPD3O75425 235 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 NFICP08651 508 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 ELF1P32519 619 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 MCM4P33991 863 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 ACOT2P49753 483 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 STARD6P59095 220 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 GPC5P78333 572 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 YWHAHQ04917 246 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 GPR17Q13304 367 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 MYBPC2Q14324 1141 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 ADALQ6DHV7 355 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 SIX5Q8N196 739 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 CXorf38Q8TB03 319 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 DDX23Q9BUQ8 820 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 LRRC3Q9BY71 257 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 ZHX3Q9H4I2 956 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 CYP4F11Q9HBI6 524 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 DLGAP2Q9P1A6 1054 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 CEP72Q9P209 647 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 AGO2Q9UKV8 859 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 INSL5Q9Y5Q6 135 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 F5P12259 2224 aa10.55□□□□□ -0.72
TMEM39A-210ENST00000490099 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 SPTLC2O15270 562 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 ECI2O75521 394 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 YEATS4O95619 227 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 CFHP08603 1231 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 GARTP22102 1010 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 TXLNAP40222 546 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 CCR2P41597 374 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.722e-8■■■□□ 15.9
TMEM39A-210ENST00000490099 CASP5P51878 434 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 ALCAMQ13740 583 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 TMEM132DQ14C87 1099 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 CENPPQ6IPU0 288 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 CCDC105Q8IYK2 499 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 SENP8Q96LD8 212 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 PANK2Q9BZ23 570 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 MFSD1Q9H3U5 465 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms