RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PCSK4Q6UW60 755 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 USP51Q70EK9 711 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 CHPFQ8IZ52 775 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 AMER2Q8N7J2 671 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 PDPRQ8NCN5 879 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 NSUN7Q8NE18 718 aaKnown RBP6.72□□□□□ -1.33
CCDC39-206ENST00000489868 RNF31Q96EP0 1072 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 SORCS2Q96PQ0 1159 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 ACO2Q99798 780 aaKnown RBP6.72□□□□□ -1.33
CCDC39-206ENST00000489868 IMPG2Q9BZV3 1241 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 NMRK2Q9NPI5 230 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 SLAMF7Q9NQ25 335 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 SIDT1Q9NXL6 827 aaKnown RBP6.72□□□□□ -1.33
CCDC39-206ENST00000489868 CTTNBP2NLQ9P2B4 639 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 GABBR1Q9UBS5 961 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 COL4A3Q01955 1670 aa6.71□□□□□ -1.33
CCDC39-206ENST00000489868 HLA-DOAP06340 250 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 GJB1P08034 283 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 PSMC1P62191 440 aaKnown RBP6.71□□□□□ -1.34
CCDC39-206ENST00000489868 GUCY1B3Q02153 619 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 GTF2H3Q13889 308 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 FAM102BQ5T8I3 360 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 GPR149Q86SP6 731 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 COL23A1Q86Y22 540 aaPredicted RBP6.71□□□□□ -1.34
CCDC39-206ENST00000489868 SLC17A8Q8NDX2 589 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
CCDC39-206ENST00000489868 C1GALT1C1Q96EU7 318 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 KMT5AQ9NQR1 393 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 SRRDQ9UH36 339 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 AGAP1Q9UPQ3 857 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.34
CCDC39-206ENST00000489868 PPM1GO15355 546 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-206ENST00000489868 TSPAN6O43657 245 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 ARIH2O95376 493 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 FTH1P19P0C7X4 201 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 HSPA6P17066 643 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 MC2RQ01718 297 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 PTPAQ15257 358 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 GEN1Q17RS7 908 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 CRB2Q5IJ48 1285 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 CFAP52Q8N1V2 620 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 ZBTB34Q8NCN2 500 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 KLHDC4Q8TBB5 520 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 TNPO1Q92973 898 aaKnown RBP6.7□□□□□ -1.34
CCDC39-206ENST00000489868 FUBP1Q96AE4 644 aaKnown RBP6.7□□□□□ -1.34
CCDC39-206ENST00000489868 RUNDC1Q96C34 613 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 SLC35A4Q96G79 324 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 WDCPQ9H6R7 721 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 BRD9Q9H8M2 597 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 TMEM74BQ9NUR3 256 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 PNPOQ9NVS9 261 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 FEZ2Q9UHY8 353 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-206ENST00000489868 STXBP5LQ9Y2K9 1186 aa6.7□□□□□ -1.34
CCDC39-206ENST00000489868 MTO1Q9Y2Z2 717 aaKnown RBP6.7□□□□□ -1.34
CCDC39-206ENST00000489868 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 H3BML4 177 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 H3BUI4 141 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 UBXN7O94888 489 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 EGR2P11161 476 aaPredicted RBP6.69□□□□□ -1.34
CCDC39-206ENST00000489868 KIF22Q14807 665 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 Q6YL49 198 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 OVCH2Q7RTZ1 564 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 PDSS2Q86YH6 399 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 DENND1CQ8IV53 801 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 TCEAL8Q8IYN2 117 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 BEND2Q8NDZ0 799 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 BOD1Q96IK1 185 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 NT5C1BQ96P26 610 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 ARMT1Q9H993 441 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 UNKLQ9H9P5 680 aaKnown RBP6.69□□□□□ -1.34
CCDC39-206ENST00000489868 GPR35Q9HC97 309 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 SYBUQ9NX95 663 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 RNF181Q9P0P0 153 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.69□□□□□ -1.34
CCDC39-206ENST00000489868 NOX1Q9Y5S8 564 aa6.69□□□□□ -1.34
CCDC39-206ENST00000489868 PIPSLA2A3N6 862 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
CCDC39-206ENST00000489868 SUN1O94901 812 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 HTR1BP28222 390 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
CCDC39-206ENST00000489868 EXOSC9Q06265 439 aaKnown RBP6.68□□□□□ -1.34
CCDC39-206ENST00000489868 CXorf57Q6NSI4 855 aaKnown RBP6.68□□□□□ -1.34
CCDC39-206ENST00000489868 FOXR2Q6PJQ5 311 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 TMPRSS9Q7Z410 1059 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 FAM43AQ8N2R8 423 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 CAMKK1Q8N5S9 505 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 CDK5RAP3Q96JB5 506 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 MED15Q96RN5 788 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 TTPALQ9BTX7 342 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 GALNT9Q9HCQ5 603 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 RLIMQ9NVW2 624 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 STAP2Q9UGK3 403 aa6.68□□□□□ -1.34
CCDC39-206ENST00000489868 FOXN1O15353 648 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms