RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
GGPS1-207ENST00000489692 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
GGPS1-207ENST00000489692 SNX27Q96L92 541 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 WDR6Q9NNW5 1121 aaKnown RBP12.77□□□□□ -0.37
GGPS1-207ENST00000489692 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 STK17AQ9UEE5 414 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 FBXL21Q9UKT6 434 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 CLUHO75153 1309 aa12.77□□□□□ -0.37
GGPS1-207ENST00000489692 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 STK25O00506 426 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 HNRNPDLO14979 420 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 CCL16O15467 120 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 XYLBO75191 536 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 UQCRHP07919 91 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 TKTP29401 623 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 OR1D2P34982 312 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 NAB2Q15742 525 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 UPP1Q16831 310 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 HAUS6Q7Z4H7 955 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 RAD54LQ92698 747 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 C18orf25Q96B23 403 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
GGPS1-207ENST00000489692 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 SMOC2Q9H3U7 446 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 PARVGQ9HBI0 331 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 PTPRHQ9HD43 1115 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 CDY1Q9Y6F8 540 aa12.76□□□□□ -0.37
GGPS1-207ENST00000489692 ADAM12O43184 909 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ZMYND10O75800 440 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 C8AP07357 584 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 KCNE1P15382 129 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 FSHRP23945 695 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ELF1P32519 619 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 AMPD3Q01432 767 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 PAK1Q13153 545 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 TDGQ13569 410 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 NR1I3Q14994 352 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 TPD52L1Q16890 204 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 COBLL1Q53SF7 1204 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ARSHQ5FYA8 562 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ARID2Q68CP9 1835 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ZPBP2Q6X784 338 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ASIC4Q96FT7 647 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 BLZF1Q9H2G9 400 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 SAMSN1Q9NSI8 373 aaKnown RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
GGPS1-207ENST00000489692 FBXW11Q9UKB1 542 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
GGPS1-207ENST00000489692 ITIH6Q6UXX5 1313 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 PRRG1O14668 218 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 KLRC4O43908 158 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 C1RP00736 705 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CLTAP09496 248 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CXCL8P10145 99 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 TNNT1P13805 278 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 FGFR3P22607 806 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 PROZP22891 400 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CASP1P29466 404 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 RPL9P32969 192 aaKnown RBP12.74□□□□□ -0.37
GGPS1-207ENST00000489692 VCPP55072 806 aaKnown RBP12.74□□□□□ -0.37
GGPS1-207ENST00000489692 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 MCL1Q07820 350 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 STIM1Q13586 685 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 FILIP1LQ4L180 1135 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 IER5LQ5T953 404 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CNNM4Q6P4Q7 775 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 LILRA6Q6PI73 481 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 DYMQ7RTS9 669 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 ADSSL1Q8N142 457 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 ST13P5Q8NFI4 369 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-207ENST00000489692 NOC3LQ8WTT2 800 aaKnown RBP12.74□□□□□ -0.37
GGPS1-207ENST00000489692 MYADMQ96S97 322 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms