RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 GRIK3Q13003 919 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 CLLU1OSQ5K130 101 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 MFSD5Q6N075 450 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 GLB1LQ6UWU2 654 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 UBR7Q8N806 425 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
CMSS1-205ENST00000489081 POLIQ9UNA4 740 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 PCDHB7Q9Y5E2 793 aa12.34□□□□□ -0.43
CMSS1-205ENST00000489081 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 POMCP01189 267 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 PFKMP08237 780 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 PLEKP08567 350 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-205ENST00000489081 CCDC172P0C7W6 258 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 FGFR1P11362 822 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 CSF2RAP15509 400 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
CMSS1-205ENST00000489081 PNPLA4P41247 253 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 KCNJ6P48051 423 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 IKBKEQ14164 716 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 MTF1Q14872 753 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.44
CMSS1-205ENST00000489081 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF560Q96MR9 790 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 HAUS4Q9H6D7 363 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-205ENST00000489081 CYP3A43Q9HB55 503 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 CNTN6Q9UQ52 1028 aa12.33□□□□□ -0.44
CMSS1-205ENST00000489081 BZW2Q9Y6E2 419 aaKnown RBP12.33□□□□□ -0.44
CMSS1-205ENST00000489081 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 SPTLC1O15269 473 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 CYP26A1O43174 497 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 WEE2P0C1S8 567 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 KRT5P13647 590 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 P4HA1P13674 534 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
CMSS1-205ENST00000489081 CLCN1P35523 988 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 TAF6P49848 677 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 TUSC3Q13454 348 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 ASTE1Q2TB18 679 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-205ENST00000489081 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.448e-8■■■■■ 44.2
CMSS1-205ENST00000489081 ZNF571Q7Z3V5 609 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-205ENST00000489081 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
CMSS1-205ENST00000489081 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 URGCPQ8TCY9 931 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 CISHQ9NSE2 258 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 LRFN2Q9ULH4 789 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 PCDHB4Q9Y5E5 795 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 EPN1Q9Y6I3 576 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-205ENST00000489081 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 SCN5AQ14524 2016 aa12.32□□□□□ -0.44
CMSS1-205ENST00000489081 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 PODXLO00592 558 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 HOXA2O43364 376 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 NDUFA10O95299 355 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 ANXA13P27216 316 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 CYLC1P35663 651 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-205ENST00000489081 USP8P40818 1118 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 RAP1GAPP47736 663 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 CLCNKBP51801 687 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF132P52740 706 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 CDH8P55286 799 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
CMSS1-205ENST00000489081 TNNC1P63316 161 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 PTK2Q05397 1052 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 SV2CQ496J9 727 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 TOGARAM2Q6ZUX3 1019 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-205ENST00000489081 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
CMSS1-205ENST00000489081 CCDC42Q96M95 316 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 UROC1Q96N76 676 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 FAM124BQ9H5Z6 455 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-205ENST00000489081 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 GDAP2Q9NXN4 497 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
CMSS1-205ENST00000489081 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 STK25O00506 426 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 B4GALT3O60512 393 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 EFCAB14O75071 495 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms