RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 HNRNPA1P09651 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
BRCA1-218ENST00000489037 TMEM191BP0C7N4 346 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 ODC1P11926 461 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 PNPLA4P41247 253 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 TAF6P49848 677 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 CYP2J2P51589 502 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 LILRA4P59901 499 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 MRPL58Q14197 206 aaKnown RBP15.44■□□□□ 0.06
BRCA1-218ENST00000489037 BMT2Q1RMZ1 405 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 SLC8B1Q6J4K2 584 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 METTL23Q86XA0 190 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 RNF135Q8IUD6 432 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 TDRD5Q8NAT2 981 aaKnown RBP15.44■□□□□ 0.06
BRCA1-218ENST00000489037 XXYLT1Q8NBI6 393 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 ZNF461Q8TAF7 563 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 PRKD2Q9BZL6 878 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 GOLPH3LQ9H4A5 285 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 AGPAT3Q9NRZ7 376 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 HOOK1Q9UJC3 728 aaKnown RBP15.44■□□□□ 0.06
BRCA1-218ENST00000489037 FBXL5Q9UKA1 691 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 DSEQ9UL01 958 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 PI4K2BG5E9Z4 385 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 ADAM12O43184 909 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 DCXO43602 365 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 TNNC2P02585 160 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 CPB1P15086 417 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 TYMPP19971 482 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 SP100P23497 879 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-218ENST00000489037 HOXD13P35453 343 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRCA1-218ENST00000489037 SV2CQ496J9 727 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 TPGS2Q68CL5 300 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 OTOP3Q7RTS5 596 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 EFCAB13Q8IY85 973 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 ZSWIM2Q8NEG5 633 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 SENP8Q96LD8 212 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 CDH22Q9UJ99 828 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 USTQ9Y2C2 406 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 DOCK6Q96HP0 2047 aa15.43■□□□□ 0.06
BRCA1-218ENST00000489037 DENND4AQ7Z401 1863 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 PRRG1O14668 218 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 PPEF2O14830 753 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 TGFB1I1O43294 461 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 EXOC3O60645 756 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
BRCA1-218ENST00000489037 OAZ2O95190 189 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 KRT19P08727 400 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 HOXA9P31269 272 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 ROR1Q01973 937 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 DPYDQ12882 1025 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 STK4Q13043 487 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 SNRNP35Q16560 246 aaKnown RBP15.42■□□□□ 0.06
BRCA1-218ENST00000489037 DUOXA2Q1HG44 320 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 OVOS1Q6IE37 1185 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 RSPO2Q6UXX9 243 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-218ENST00000489037 CBWD2Q8IUF1 395 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 THEM5Q8N1Q8 247 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 TMEM130Q8N3G9 435 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 CSGALNACT2Q8N6G5 542 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 SLC7A14Q8TBB6 771 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 WDR6Q9NNW5 1121 aaKnown RBP15.42■□□□□ 0.06
BRCA1-218ENST00000489037 ITGA11Q9UKX5 1188 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 MAFFQ9ULX9 164 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 POLIQ9UNA4 740 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
BRCA1-218ENST00000489037 TIMM13Q9Y5L4 95 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-218ENST00000489037 CYB561D2O14569 222 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-218ENST00000489037 TBC1D4O60343 1298 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 ABLIM3O94929 683 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 RHOBTB3O94955 611 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 LRG1P02750 347 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 ITGB3P05106 788 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 TNNI1P19237 187 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 POLR2BP30876 1174 aaKnown RBP15.41■□□□□ 0.06
BRCA1-218ENST00000489037 RBP5P82980 135 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 FAM160A1Q05DH4 1040 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 KCNB1Q14721 858 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 KIAA0895Q8NCT3 520 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 EPHX3Q9H6B9 360 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 CYP4F11Q9HBI6 524 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 RMND1Q9NWS8 449 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 AFF4Q9UHB7 1163 aaKnown RBP15.41■□□□□ 0.06
BRCA1-218ENST00000489037 MUTYHQ9UIF7 546 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 CLUHO75153 1309 aa15.41■□□□□ 0.06
BRCA1-218ENST00000489037 WDR27A2RRH5 827 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 C2CD4DB7Z1M9 353 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 PDXKO00764 312 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms