RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 MCM7P33993 719 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 CRHR1P34998 444 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 FAPQ12884 760 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 FHL2Q14192 279 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 Q6ZPA2 131 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 MCM10Q7L590 875 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 ZNF627Q7L945 461 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 MRGPREQ86SM8 312 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 CERS3Q8IU89 383 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 CNTD1Q8N815 330 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 TSPYL6Q8N831 410 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 GPR156Q8NFN8 814 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 ZNF480Q8WV37 535 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 NEU4Q8WWR8 484 aaPredicted RBP3.47□□□□□ -1.85
CALD1-221ENST00000489019 ARHGAP45Q92619 1136 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 CLIP3Q96DZ5 547 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 SLC2A13Q96QE2 648 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 MRIQ9BWK5 157 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 ACE2Q9BYF1 805 aaPredicted RBP3.47□□□□□ -1.85
CALD1-221ENST00000489019 SPC25Q9HBM1 224 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 DNAJC28Q9NX36 388 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 TSPYL4Q9UJ04 414 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
CALD1-221ENST00000489019 ATP8A1Q9Y2Q0 1164 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
CALD1-221ENST00000489019 SBNO1A3KN83 1393 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 ARHGEF10O15013 1369 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 FLT4P35916 1363 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 TBKBP1A7MCY6 615 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 B5MCH6 92 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 PHF2O75151 1096 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 SCAF4O95104 1147 aaKnown RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 ZNF853P0CG23 659 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MTHFD2P13995 350 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MAKP20794 623 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 HOXC9P31274 260 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 SREBF1P36956 1147 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MCAMP43121 646 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 HMGA2P52926 109 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 FAM189BP81408 668 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MALLQ13021 153 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 HDAC1Q13547 482 aaPredicted RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 BECN1Q14457 450 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 BMT2Q1RMZ1 405 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MTHFSDQ2M296 383 aaKnown RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 ANO4Q32M45 955 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 INAVAQ3KP66 663 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 ANKRD45Q5TZF3 282 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 RHOUQ7L0Q8 258 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 CBARPQ8N350 705 aaPredicted RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 ZNF276Q8N554 614 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 C8orf58Q8NAV2 365 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 KCNH5Q8NCM2 988 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 RNF169Q8NCN4 708 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 OR7D4Q8NG98 312 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 OR2I1PQ8NGU4 316 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 CPT1CQ8TCG5 803 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 SLC25A43Q8WUT9 341 aaPredicted RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 FATE1Q969F0 183 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 GCC1Q96CN9 775 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 PAWRQ96IZ0 340 aaKnown RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 NDC1Q9BTX1 674 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MLST8Q9BVC4 326 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 STK31Q9BXU1 1019 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 TEX101Q9BY14 249 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 BRINP2Q9C0B6 783 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 GREM2Q9H772 168 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 NRDE2Q9H7Z3 1164 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 SPON1Q9HCB6 807 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 RBM12Q9NTZ6 932 aaKnown RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 SLC5A4Q9NY91 659 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 MCM8Q9UJA3 840 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 HDAC5Q9UQL6 1122 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 SIK3Q9Y2K2 1263 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 CHST2Q9Y4C5 530 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA2Q9Y5H1 932 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 ATRNL1Q5VV63 1379 aa3.46□□□□□ -1.86
CALD1-221ENST00000489019 RGPD8O14715 1765 aaPredicted RBP3.46□□□□□ -1.86
CALD1-221ENST00000489019 PNPLA7Q6ZV29 1317 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 NPHP4O75161 1426 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 XRN1Q8IZH2 1706 aaKnown RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 FMN2Q9NZ56 1722 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 DLG5Q8TDM6 1919 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 CXorf49A8MYA2 514 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 PRR5-ARHGAP8B1AHC4 643 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 CHL1O00533 1208 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 TRIM24O15164 1050 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 ZNF185O15231 689 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 ADH4P08319 380 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 ALOX15P16050 662 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 KRT4P19013 534 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 AGXTP21549 392 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 GUCY1A2P33402 732 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 PTPN7P35236 360 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 IARSP41252 1262 aaKnown RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 SLC6A9P48067 706 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 FLT3LGP49771 235 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 CDKN1CP49918 316 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 AMPD3Q01432 767 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 NHLH2Q02577 135 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms