RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 KCNJ6P48051 423 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 TAF6P49848 677 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 GATMP50440 423 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 CLCNKBP51801 687 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
CLDN11-208ENST00000488989 DRAP1Q14919 205 aaPredicted RBP17.19■□□□□ 0.34
CLDN11-208ENST00000488989 RRAGAQ7L523 313 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 LIMS2Q7Z4I7 341 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 ZNF280BQ86YH2 543 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 OR8K1Q8NGG5 319 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 SHC3Q92529 594 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 LBHD1Q9BQE6 289 aaPredicted RBP17.19■□□□□ 0.34
CLDN11-208ENST00000488989 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 ABHD10Q9NUJ1 306 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 AIPL1Q9NZN9 384 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 KIAA1671Q9BY89 1806 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 CASTOR2A6NHX0 329 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 LRRC53A6NM62 1247 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 TBKBP1A7MCY6 615 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 F8VZ95 297 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 B4GALT3O60512 393 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 P4HA1P13674 534 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
CLDN11-208ENST00000488989 ASPAP45381 313 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLDN11-208ENST00000488989 LILRA4P59901 499 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 MEA1Q16626 185 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 WDR72Q3MJ13 1102 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 SV2CQ496J9 727 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 CD300LGQ6UXG3 332 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 FMNL3Q8IVF7 1028 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 LRRC43Q8N309 656 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 TMEM175Q9BSA9 504 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 CYP3A43Q9HB55 503 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLDN11-208ENST00000488989 CNTN6Q9UQ52 1028 aa17.18■□□□□ 0.34
CLDN11-208ENST00000488989 TSC2P49815 1807 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 SPTLC1O15269 473 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 UPP2O95045 317 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 FAM163BP0C2L3 166 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 SOX5P35711 763 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 STAT1P42224 750 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 RAPGEF1Q13905 1077 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 E4F1Q66K89 784 aaPredicted RBP17.17■□□□□ 0.34
CLDN11-208ENST00000488989 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 LRRC8AQ8IWT6 810 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 FAM71AQ8IYT1 594 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 CMTR2Q8IYT2 770 aaKnown RBP17.17■□□□□ 0.34
CLDN11-208ENST00000488989 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 ARID3AQ99856 593 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 PAAF1Q9BRP4 392 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 POLIQ9UNA4 740 aa17.17■□□□□ 0.34
CLDN11-208ENST00000488989 FOXN3O00409 490 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 DEKP35659 375 aaKnown RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 YWHAEP62258 255 aaKnown RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 TNNC1P63316 161 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 CDK17Q00537 523 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 SFMBT2Q5VUG0 894 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 WDR59Q6PJI9 974 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 DPH6Q7L8W6 267 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 TTC39CQ8N584 583 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 FAM193BQ96PV7 902 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 SLC9A7Q96T83 725 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 CWH43Q9H720 699 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
CLDN11-208ENST00000488989 NXF1Q9UBU9 619 aaKnown RBP17.16■□□□□ 0.34
CLDN11-208ENST00000488989 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 ZBBXA8MT70 800 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 TACC1O75410 805 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 GJB5O95377 273 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 FERP16591 822 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 IGFBP6P24592 240 aaPredicted RBP17.15■□□□□ 0.34
CLDN11-208ENST00000488989 PRKCIP41743 596 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 INCA1Q0VD86 236 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 IRF2BP2Q7Z5L9 587 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 TMEM139Q8IV31 216 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 TOP6BLQ8N6T0 577 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 SDCBP2Q9H190 292 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
CLDN11-208ENST00000488989 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
CLDN11-208ENST00000488989 CARNS1A5YM72 827 aa17.14■□□□□ 0.33
CLDN11-208ENST00000488989 B3GAT3O94766 335 aa17.14■□□□□ 0.33
CLDN11-208ENST00000488989 GALTP07902 379 aa17.14■□□□□ 0.33
CLDN11-208ENST00000488989 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
CLDN11-208ENST00000488989 ZNF132P52740 706 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms