RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 OAZ2O95190 189 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 NFICP08651 508 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 SRFP11831 508 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 TYMPP19971 482 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 GARTP22102 1010 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 AVPR2P30518 371 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 GUCY2FP51841 1108 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 PTPN5P54829 565 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 HTR4Q13639 388 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 E2F4Q16254 413 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 C9orf57Q5W0N0 161 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 AVENQ9NQS1 362 aaPredicted RBP14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 KBTBD4Q9NVX7 518 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 FAM13BQ9NYF5 915 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 INSL5Q9Y5Q6 135 aa14.96□□□□□ -0.01
SPTLC1-207ENST00000488921 MUC6Q6W4X9 2439 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 OR6C75A6NL08 312 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ANHXE9PGG2 379 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 PDGFBP01127 241 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 PTPN2P17706 415 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ADSSP30520 456 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ME1P48163 572 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 VCPP55072 806 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 LILRA4P59901 499 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 NTHL1P78549 312 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 OVOS1Q6IE37 1185 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 RSAD2Q8WXG1 361 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 FGF13Q92913 245 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 DHX58Q96C10 678 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ZNF560Q96MR9 790 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 TRIM9Q9C026 710 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 IRF2BPLQ9H1B7 796 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 HCFC1R1Q9NWW0 138 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 DNMT3BQ9UBC3 853 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 DSEQ9UL01 958 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 MRPS23Q9Y3D9 190 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ZDBF2Q9HCK1 2354 aa14.95□□□□□ -0.02
SPTLC1-207ENST00000488921 ANO9A1A5B4 782 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 PIRO00625 290 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 RHOP08100 348 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 TAF6P49848 677 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 CLCN5P51795 746 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 CASP5P51878 434 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 ASIC1P78348 528 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 KCNA1Q09470 495 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 PLD1Q13393 1074 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 FOXD4L6Q3SYB3 417 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 IQCEQ6IPM2 695 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 ARMCX5Q6P1M9 558 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 CNNM4Q6P4Q7 775 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 CRELD2Q6UXH1 353 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 FOXD4L3Q6VB84 417 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 BRSK2Q8IWQ3 736 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 SLC44A3Q8N4M1 653 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 FAM213AQ9BRX8 229 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 WNT16Q9UBV4 365 aa14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 TIMM13Q9Y5L4 95 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-207ENST00000488921 ZNF197O14709 1029 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 PPEF2O14830 753 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 EIF3DO15371 548 aaKnown RBP eCLIP14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 NARSO43776 548 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 PNPLA4P41247 253 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 NHLH1Q02575 133 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 SV2CQ496J9 727 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 PDZD4Q76G19 769 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 METTL23Q86XA0 190 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 NPAS3Q8IXF0 933 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 SIX5Q8N196 739 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 TMEM130Q8N3G9 435 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 LEMD2Q8NC56 503 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 SPRYD3Q8NCJ5 442 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 PRSS33Q8NF86 280 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 ITFG1Q8TB96 612 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 CACTINQ8WUQ7 758 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 SAAL1Q96ER3 474 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 IKZF4Q9H2S9 585 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 RBAKQ9NYW8 714 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 GDE1Q9NZC3 331 aa14.93□□□□□ -0.02
SPTLC1-207ENST00000488921 UBE4BO95155 1302 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 MIA3Q5JRA6 1907 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 POLR2DO15514 142 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 EXTL3O43909 919 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 MICAL2O94851 1124 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 SEC24AO95486 1093 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 CYP11A1P05108 521 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 CFHP08603 1231 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 RFX1P22670 979 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 TWF1Q12792 350 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 GPR17Q13304 367 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 FAM26FQ5R3K3 315 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms