RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 KXD1Q9BQD3 176 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 STRA6Q9BX79 667 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 SEL1LQ9UBV2 794 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 SPTLC2O15270 562 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 GCNT3O95395 438 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 AOC1P19801 751 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 RFX1P22670 979 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 CASP5P51878 434 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 TWF1Q12792 350 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 POTEHQ6S545 545 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 CRELD2Q6UXH1 353 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 HS6ST3Q8IZP7 471 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 SENP8Q96LD8 212 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 FAM213AQ9BRX8 229 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 FGFBP2Q9BYJ0 223 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 ASB7Q9H672 318 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 TBC1D17Q9HA65 648 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 SLC2A4RGQ9NR83 387 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 PANK4Q9NVE7 773 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 EXOC7Q9UPT5 735 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 DERAQ9Y315 318 aa12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-215ENST00000488920 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 OR6C75A6NL08 312 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 PIRO00625 290 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 VNN2O95498 520 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 CEBPBP17676 345 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 POSTNQ15063 836 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 OVOS1Q6IE37 1185 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 ZSWIM2Q8NEG5 633 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 ZNF512Q96ME7 567 aaPredicted RBP12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 RTP3Q9BQQ7 232 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 AVENQ9NQS1 362 aaPredicted RBP12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 ARHGEF3Q9NR81 526 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 DPP3Q9NY33 737 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 GDE1Q9NZC3 331 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 CEP72Q9P209 647 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 MAFFQ9ULX9 164 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
CCHCR1-215ENST00000488920 FRMD3A2A2Y4 597 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 ZNF197O14709 1029 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PPP6R2O75170 966 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PRPF6O94906 941 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 ODC1P11926 461 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 TYMPP19971 482 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 CCR2P41597 374 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 CDR1P51861 262 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 DUSP4Q13115 394 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 GPR17Q13304 367 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PRSS36Q5K4E3 855 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 ATAD1Q8NBU5 361 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 HPS3Q969F9 1004 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 TMEM209Q96SK2 561 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PLA2G2FQ9BZM2 168 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 CRISPLD1Q9H336 500 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 PIEZO1Q92508 2521 aa12.92□□□□□ -0.34
CCHCR1-215ENST00000488920 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 MYH11P35749 1972 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 CYB561D2O14569 222 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 CUTAO60888 179 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 IL18RAPO95256 599 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 YEATS4O95619 227 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 DCNP07585 359 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 MYL4P12829 197 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms